DRSC/TRiP Functional Genomics Resources

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Protein Alignment repo and al

DIOPT Version :10

Sequence 1:NP_477026.1 Gene:repo / 47285 FlyBaseID:FBgn0011701 Length:612 Species:Drosophila melanogaster
Sequence 2:XP_061512474.1 Gene:al / 1277963 VectorBaseID:AGAMI1_004552 Length:353 Species:Anopheles gambiae


Alignment Length:182 Identity:67/182 - (36%)
Similarity:86/182 - (47%) Gaps:50/182 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   290 GSSSKKKGDPNG-----------------IKKKKTRTTFTAYQLEELERAFERAPYPDVFAREEL 337
            |||.   ||||.                 .|:::.|||||::||||||:||.|..|||||.||||
Mosquito    37 GSSG---GDPNSPLSDPHSDDGGDDFAPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTREEL 98

  Fly   338 AIKLNLSESRVQVWFQNRRAKWRKHEPPRKTGYIKTSTPPTATLNPGTLAPPFTSY-------PQ 395
            |:|:.|:|:|:|||||||||||||.|.....|:                  |:..|       |.
Mosquito    99 AMKIGLTEARIQVWFQNRRAKWRKQEKVGPQGH------------------PYNPYLASAGQVPS 145

  Fly   396 TTTVTPPGSMDSWTSYQTPYELTPQFSLLSPAASPYGTYSGQY---GAYVHE 444
            .|.|.|  |:.........:.|...|...|.||..|.:..|.:   .||.::
Mosquito   146 ATVVAP--SLPPNPFSHLGFNLRKPFDAASLAAFRYPSLGGSHMLPSAYFNQ 195

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
repoNP_477026.1 Homeodomain 313..361 CDD:459649 34/47 (72%)
alXP_061512474.1 None

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