Protein Alignment repo and Vsx1

DIOPT Version :10

• Sequence 1: NP_477026.1
• Gene: repo / 47285
• FlyBaseID: FBgn0011701
• Length: 612
• Species: Drosophila melanogaster
• Sequence 2: NP_473409.1
• Gene: Vsx1 / 114889
• MGIID: 1890816
• Length: 363
• Species: Mus musculus
• Alignment Length: 231
• Identity: 78/231 - (33%)
• Similarity: 104/231 - (45%)
• Gaps: 65/231 - (28%)

  Fly   230 MCSQLEAGGA-----------GVTPPSSSSTVVNGTTNGTGNANSSSSAGVGIQGAAGTAGGVA- 282
            :|....|.||           |..|||:::         ...|.....|.:.:..:||....||
Mouse    72 LCGSCPARGALPLGLGLLCGFGAQPPSAAA---------AARARCLLLADLRLLPSAGPEPAVAQ 127

  Fly   283 -----APA----------AKKDGSS-SKKKGDP------NGIKKKKTRTTFTAYQLEELERAFER 325
                 .||          :..||.| |::|.||      ...||::.||.|||:||||||:||..
Mouse   128 GPVHPPPALGSQQRSESVSTSDGDSPSEEKNDPKMSLILGKRKKRRHRTVFTAHQLEELEKAFGE 192

  Fly   326 APYPDVFAREELAIKLNLSESRVQVWFQNRRAKWRKHEPPRKTG-------------YIKTSTP- 376
            |.||||:|||.||.|..|.|.|:|||||||||||||.|  ::.|             .::...|
Mouse   193 AHYPDVYAREMLAAKTELPEDRIQVWFQNRRAKWRKRE--KRWGGSSVMAEYGLYGAMVRHCIPL 255

  Fly   377 PTATLN-----PGTLAPPFTS-YPQTTTVTPPGSMD 406
            |.:.||     .|:.||.... :.::|.:..|.|.|
Mouse   256 PDSVLNSADSLQGSCAPWLLGMHKKSTGMRKPESED 291

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
repo	NP_477026.1	Homeodomain	313..361	CDD:459649	34/47 (72%)
Vsx1	NP_473409.1	Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	1..25
		Octapeptide motif	31..38
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	42..66
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	122..166		11/43 (26%)
		Nuclear localization signal. /evidence=ECO:0000255	168..173		2/4 (50%)
		Homeodomain	172..228	CDD:459649	38/55 (69%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	300..363