Protein Alignment repo and phox2b

DIOPT Version :10

• Sequence 1: NP_477026.1
• Gene: repo / 47285
• FlyBaseID: FBgn0011701
• Length: 612
• Species: Drosophila melanogaster
• Sequence 2: NP_001116492.1
• Gene: phox2b / 100124329
• XenbaseID: XB-GENE-1000415
• Length: 293
• Species: Xenopus tropicalis
• Alignment Length: 238
• Identity: 72/238 - (30%)
• Similarity: 94/238 - (39%)
• Gaps: 74/238 - (31%)

  Fly   263 SSSSAGVGIQ------------GAAGTAGGVAAPAAKKDGSSS-------KKKGDPNGI----KK 304
            ||.|...|.|            |......|..:....:|..||       |...|..|:    |:
 Frog    34 SSCSQASGFQYNPIRTTFGATSGCPSLTPGSCSLGTLRDHQSSPYAAVPYKLFTDHGGLNEKRKQ 98

  Fly   305 KKTRTTFTAYQLEELERAFERAPYPDVFAREELAIKLNLSESRVQVWFQNRRAKWRKHE------ 363
            ::.|||||:.||:||||.|....|||::.|||||:|::|:|:||||||||||||:||.|
 Frog    99 RRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQNRRAKFRKQERAAAAA 163

  Fly   364 -PPRKTGYI--------------KTSTPPTATLNPGTLAPPFTS-----------------YPQT 396
             ...|.|..              ..|..|.:|..||....|..|                 .|..
 Frog   164 AAAAKNGSSGKKSDSSRDEESKDSKSADPDSTGGPGNNPNPTPSCGGGPSPSGAQGNGVPQEPGK 228

  Fly   397 TTVTPPGSMDSWTSYQTPYELTPQFSLLSPAASPYGTYSGQYG 439
            ..|..|||:.|             .|::..:..|.|..:|..|
 Frog   229 VGVPGPGSLTS-------------ASVVGVSGGPQGWATGPGG 258

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
repo	NP_477026.1	Homeodomain	313..361	CDD:459649	30/47 (64%)
phox2b	NP_001116492.1	Homeodomain	99..155	CDD:459649	35/55 (64%)