Protein Alignment repo and shox2

DIOPT Version :9

• Sequence 1: NP_477026.1
• Gene: repo / 47285
• FlyBaseID: FBgn0011701
• Length: 612
• Species: Drosophila melanogaster
• Sequence 2: NP_001093694.1
• Gene: shox2 / 100101703
• XenbaseID: XB-GENE-480993
• Length: 311
• Species: Xenopus tropicalis
• Alignment Length: 323
• Identity: 89/323 - (27%)
• Similarity: 126/323 - (39%)
• Gaps: 77/323 - (23%)

  Fly   223 KLKKPDEMCSQ---LEAGGAGVTPPSSSSTVVNGTTNGT---GNANSSSSAGVGIQGAAGTAGGV 281
            |:|:..||.:.   ||:|.|....|        |...|.   |.|.:....|.|  |..|..||.
 Frog    15 KIKEKKEMITYREVLESGPARGKEP--------GCGEGAREDGLAGNRCIGGGG--GGGGGGGGA 69

  Fly   282 AAPAAKKDGSSS--KKKGDP--------------------------NGIKKKKTRTTFTAYQLEE 318
            .:|..:.|.|..  ::.|.|                          ..||::::||.||..||.|
 Frog    70 RSPVLELDLSVERIRESGSPKLTEVSPEIKERKEELKQQALEEEGQTKIKQRRSRTNFTLEQLNE 134

  Fly   319 LERAFERAPYPDVFAREELAIKLNLSESRVQVWFQNRRAKWRKHEPPRKTGYIKTSTPPTATLNP 383
            |||.|:...|||.|.||||:.:|.|||:||||||||||||.||.|.....|.:         :..
 Frog   135 LERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRKQENQLHKGVL---------IGA 190

  Fly   384 GT------LAPPFTSYPQTTTVTPPGSMDSWTSYQT-PYELTPQFSLLSPAA------SPYGTYS 435
            |:      :||    |.....:..|...||..:..: .:::..|..|.|..|      .|:.|..
 Frog   191 GSQFEACRVAP----YVNVGALRMPFQQDSHCNVPSLSFQVQAQLQLDSAVAHAHHHLHPHLTAH 251

  Fly   436 GQYGAYVHESQLFPMRHYEYGSPTRMEMGATTGSVAGNGDESVANGGSYQTAELQTAQQQQLA 498
            ..|       .:||...:.....|.....||..||......:..:..:...|:|:...::..|
 Frog   252 APY-------MMFPAPPFGLPLATLAAETATAASVVAAAAAAKTSSKNSSIADLRLKAKKHAA 307

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
repo	NP_477026.1	Homeobox	313..360	CDD:278475	31/46 (67%)
shox2	NP_001093694.1	Homeobox	123..177	CDD:365835	35/53 (66%)
		OAR	292..307	CDD:367680	2/14 (14%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0000011
OrthoInspector	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	1	1.030	-	avgDist	Average_Evolutionary_Distance	R6207
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	3	2.940