DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment repo and prop1

DIOPT Version :9

Sequence 1:	NP_477026.1	Gene:	repo / 47285	FlyBaseID:	FBgn0011701	Length:	612	Species:	Drosophila melanogaster
Sequence 2:	NP_001170932.2	Gene:	prop1 / 100001377	ZFINID:	ZDB-GENE-081107-40	Length:	227	Species:	Danio rerio

Alignment Length:	198	Identity:	62/198 - (31%)
Similarity:	83/198 - (41%)	Gaps:	52/198 - (26%)

- Green bases have known domain annotations that are detailed below.

  Fly   264 SSSAGVGIQGAAGTAGGVAAPAAKKDGSSSKKKG--------DPNGIKKKKTRTTFTAYQLEELE 320
            ||||.:.:|         ..|......|.|.:.|        .|:   :::.||||:..|||.||
Zfish    20 SSSADIDVQ---------IHPRKVSQKSESVRDGGARARPYPSPS---RRRHRTTFSNEQLEHLE 72

  Fly   321 RAFERAPYPDVFAREELAIKLNLSESRVQVWFQNRRAKWRKHE----------------PPRKTG 369
            .||.:..|||::.|||||....|:|:|:||||||||||.||.:                |...|.
Zfish    73 LAFRQNHYPDIYYREELARVTKLNEARIQVWFQNRRAKQRKQDRITQKSLAVSMMPVRGPLFSTM 137

  Fly   370 YIKTSTPPTATLNPGTLAPPFTSYPQTTTVTPPGSMDSWTSYQTPYELTPQFSLLSPAASPYGTY 434
            .:.:|........|.:|    ...||.:.|.|||.            ..|..|..|..:||.|:.
Zfish   138 CVSSSAMGRQCQCPHSL----PHVPQFSPVLPPGG------------YPPHPSSGSQFSSPSGSL 186

  Fly   435 SGQ 437
            ..|
Zfish   187 PSQ 189

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
repo	NP_477026.1	Homeobox	313..360	CDD:278475	28/46 (61%)
prop1	NP_001170932.2	Homeobox	59..112	CDD:278475	32/52 (62%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0000011
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	2	1.910