DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment SrpRbeta and Tsf2

DIOPT Version :9

Sequence 1:	NP_001261596.1	Gene:	SrpRbeta / 47283	FlyBaseID:	FBgn0011509	Length:	244	Species:	Drosophila melanogaster
Sequence 2:	NP_524044.1	Gene:	Tsf2 / 39435	FlyBaseID:	FBgn0036299	Length:	819	Species:	Drosophila melanogaster

Alignment Length:	153	Identity:	29/153 - (18%)
Similarity:	58/153 - (37%)	Gaps:	33/153 - (21%)

- Green bases have known domain annotations that are detailed below.

  Fly    62 SAIFMQLIHGKFPATFTSIKENVGDYRTGSASARLVDIPGHYRVRDKCLEL-------------- 112
            |.:|:.|: |....|..:.:.:..:::|    .|:|........:.||..|
  Fly     4 SLVFVALV-GALCFTLANAQHHYDEHKT----TRMVWCTKSQAEQYKCQNLTVAIERDRALFDEV 63

  Fly   113 -------YKHRAKGIVFVVDSVTAHKDIRDVADFLYTILSDSATQPCSVLVLCNKQDQTTA--KS 168
                   ..:.|...:..:|...||....|..| ::|....::..|    ::..|.:...|  :|
  Fly    64 FLNLTCFMAYSADECIHHIDREKAHITTLDAGD-VFTAGRYNSLIP----IMQEKLEGGFADYQS 123

  Fly   169 AQVIKSLLESELHTVRDTRSRKL 191
            ..|||.....:|:.:||.|::::
  Fly   124 VAVIKKGSLPDLNNLRDMRNKRV 146

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
SrpRbeta	NP_001261596.1	SR_beta	49..243	CDD:206691	29/153 (19%)
SrpRbeta	NP_001261596.1	SRPRB	51..221	CDD:255367	29/153 (19%)
Tsf2	NP_524044.1	PBP2_transferrin	32..372	CDD:270247	23/120 (19%)
		PBP2_transferrin	450..792	CDD:270247
		TR_FER	452..790	CDD:214514
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	P	PTHR11485
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	1	1.100