DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment SrpRbeta and Tsf3

DIOPT Version :9

Sequence 1:	NP_001261596.1	Gene:	SrpRbeta / 47283	FlyBaseID:	FBgn0011509	Length:	244	Species:	Drosophila melanogaster
Sequence 2:	NP_523759.1	Gene:	Tsf3 / 36800	FlyBaseID:	FBgn0034094	Length:	714	Species:	Drosophila melanogaster

Alignment Length:	146	Identity:	35/146 - (23%)
Similarity:	52/146 - (35%)	Gaps:	37/146 - (25%)

- Green bases have known domain annotations that are detailed below.

  Fly    68 LIHGKFPATFTSIKENVGDYRTGSASAR--LVDIPGHYRVRDKCLELYKHRAK-GIVFVVDSV-- 127
            ::.|.| |:|.||...|..........|  :|:..|.||...|...|.:.::. ..|..||.:
  Fly     7 ILVGLF-ASFLSISMCVAVQPPDDGKLRVCVVESRGVYRKTPKFCPLLEAKSNIECVIGVDRLDC 70

  Fly   128 -------TAHKDIRDVADFLYTILSDSATQPCSVLVLCNKQDQTTAKSAQVIKSLLESE------ 179
                   |||..:....|.:       |.:..||.:|       .|...:..:|..|.|
  Fly    71 VRRIHKGTAHFGVLTSEDLV-------AARWASVEIL-------VASELRSHESHFEYEIVAVVD 121

  Fly   180 ----LHTVRDTRSRKL 191
                :|||.|.|..:|
  Fly   122 NHANIHTVHDLRGARL 137

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
SrpRbeta	NP_001261596.1	SR_beta	49..243	CDD:206691	35/146 (24%)
SrpRbeta	NP_001261596.1	SRPRB	51..221	CDD:255367	35/146 (24%)
Tsf3	NP_523759.1	PBP2_transferrin	33..368	CDD:270247	28/119 (24%)
		PBP2_transferrin	369..681	CDD:270247
		TR_FER	370..656	CDD:214514
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	P	PTHR11485
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	1	1.100