DRSC/TRiP Functional Genomics Resources

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Protein Alignment peo and vih

DIOPT Version :10

Sequence 1:NP_524888.1 Gene:peo / 47272 FlyBaseID:FBgn0288856 Length:244 Species:Drosophila melanogaster
Sequence 2:NP_648582.1 Gene:vih / 44118 FlyBaseID:FBgn0264848 Length:178 Species:Drosophila melanogaster


Alignment Length:161 Identity:37/161 - (22%)
Similarity:71/161 - (44%) Gaps:31/161 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 KDDKLLITTIQQEYKILAEYKMIESEKLSGIYVIPSYANSLQWFGVFFG-RQGLYAESVFRFTIL 73
            ||:..:...:.:|...|    |:.:|:  ||...|...|..:|.|...| |..:|:...:|.::.
  Fly    28 KDNHAVSKRLHKELMNL----MMANER--GISAFPDGENIFKWVGTIAGPRNTVYSGQTYRLSLD 86

  Fly    74 LPDRFPDDKSLPSIIFQQDVIHPHV------CPYTHSLDVSHAFPEWRCGEDHLWQLLKYLQVIF 132
            .|:.:|  .:.|.:.|.....||:|      |     ||:..  .:|....| :..:|..:|.:.
  Fly    87 FPNSYP--YAAPVVKFLTSCFHPNVDLQGAIC-----LDILK--DKWSALYD-VRTILLSIQSLL 141

  Fly   133 SDPLDSIRGIEVDKLKNSEAAELLMNNKEEY 163
            .:|.:       :...|::|| ::.|:::||
  Fly   142 GEPNN-------ESPLNAQAA-MMWNDQKEY 164

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
peoNP_524888.1 UEV_AKTIP 23..135 CDD:467434 27/118 (23%)
vihNP_648582.1 UBCc_UBE2C 34..173 CDD:467411 35/155 (23%)

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