DRSC/TRiP Functional Genomics Resources

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Protein Alignment peo and Ubc6

DIOPT Version :10

Sequence 1:NP_524888.1 Gene:peo / 47272 FlyBaseID:FBgn0288856 Length:244 Species:Drosophila melanogaster
Sequence 2:NP_524230.2 Gene:Ubc6 / 40610 FlyBaseID:FBgn0004436 Length:151 Species:Drosophila melanogaster


Alignment Length:164 Identity:38/164 - (23%)
Similarity:72/164 - (43%) Gaps:36/164 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 KILAEYKMIESEKLSGIYVIPSYANSLQWFGVFFGRQGL-YAESVFRFTILLPDRFPDDKSLPSI 87
            :::.::|.::.:..:|:...|:..|.:.|..|.||.... :.:..|:.||...:.:|:..  |::
  Fly     8 RLMRDFKRLQEDPPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNKP--PTV 70

  Fly    88 IFQQDVIHPHV------C------PYTHSLDVSHAFPEWRCGEDHLWQLLKYLQVIFSDPLDSIR 140
            .|...|.||:|      |      .::.:.|||              .:|..:|.:.|||     
  Fly    71 RFVSKVFHPNVYADGGICLDILQNRWSPTYDVS--------------AILTSIQSLLSDP----- 116

  Fly   141 GIEVDKLKNSEAAELLMNNKEEYVARVQENIKES 174
              ..:...||.||:|...|:.||..||:..:::|
  Fly   117 --NPNSPANSTAAQLYKENRREYEKRVKACVEQS 148

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
peoNP_524888.1 UEV_AKTIP 23..135 CDD:467434 25/123 (20%)
Ubc6NP_524230.2 UBCc_UBE2A_2B 3..145 CDD:467410 37/159 (23%)

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