DRSC/TRiP Functional Genomics Resources

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Protein Alignment l(3)05822 and Sh3d19

DIOPT Version :10

Sequence 1:NP_652051.1 Gene:l(3)05822 / 47260 FlyBaseID:FBgn0010877 Length:600 Species:Drosophila melanogaster
Sequence 2:XP_006232845.1 Gene:Sh3d19 / 295171 RGDID:1304885 Length:1071 Species:Rattus norvegicus


Alignment Length:881 Identity:180/881 - (20%)
Similarity:276/881 - (31%) Gaps:358/881 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 PSRPA-----PAPPGSRGQSAAAGAN------------ASLEQLRLQLQQQHLQQ-QQGAGGGLQ 50
            |.|||     ..|||....|...|.:            .|.||:..::.|..:.. .........
  Rat    90 PLRPASWFPGAPPPGLGFPSTPVGGSWRPNDLVPAELPPSYEQVIKEINQVQVNSTNNNNAAATP 154

  Fly    51 KLTIKL-------------PPP----PKGPLQSQHKRTTVSNNNNG----SLFD----------- 83
            :.||..             |||    |..||||. ...:..|...|    .:||           
  Rat   155 RSTITSATQTDFPEEIDGDPPPTLQAPLKPLQSS-PAASAGNLPPGVAPLIVFDICEEQNCPEKP 218

  Fly    84 --------EPTGGTSI----------TRKFPQARYTPATNWDDDPFGGGSNGNDRFKKMPPPRPP 130
                    .|...|::          .:..|::..||..:|                        
  Rat   219 SATRCPVPRPRSKTNLRPVARDAHSKEKNVPKSPVTPREDW------------------------ 259

  Fly   131 PPKVL------------VNGQNMTKSNSSMASAVTGGTGRLMSNI-------------FHRKKST 170
            ||:.|            :|..|..:|.:::.|.:....|:..:.|             ...|.:.
  Rat   260 PPQCLLDSTCNLDSQSVMNIMNTEQSQNTIISRIKAFEGQTSTEIPGPPKKPEIIPRTVPPKPAV 324

  Fly   171 STA------SAAASKAA------AENRVYGLSSGNAGATPSNNSSSSASSAAFSNVDWNAAWNTA 223
            |:.      ..||::|:      ||||:...|  ..|.|    |.||...|..:.|.........
  Rat   325 SSGKPLVAPKPAANRASGEWDSWAENRLKVTS--REGLT----SYSSPQEAGITPVTKPELPKKP 383

  Fly   224 TTTTTTTSSSSHSSHYASQQTADAQLISFDSPPSSPTFTQKSNS-----------DCVSVD---S 274
            |...|.|::...|......::.||.. ...:|...|...:||.|           ..|||.   |
  Rat   384 TPGLTRTANHETSGGRPMAESPDAGK-KIPTPAPRPLLPKKSASPDAPPYPSVPPKLVSVPPRLS 447

  Fly   275 FSSDSNF------SSPNNGSVSQPES---------GFEDDYHRSRPSTQSPLDPWEAVDSVGLGG 324
            .:|.:..      ..|:|..|..|:|         .|:||.   .|::.||.:            
  Rat   448 VTSQAKAFRLPGEGPPSNPPVPAPQSKALGDIDLISFDDDV---LPTSGSPAE------------ 497

  Fly   325 VDSFGSAPVRQTYQVQSRGSDNPLCNGKSLLP-PTQSLTMPTIIKPKISQKP-----KAPKPPPF 383
             :..||..|...:|:.::   ......:::.| ||:.   ||:|  :|..||     :.|:.||.
  Rat   498 -EPIGSEMVLDPFQLPTK---TEATKERAVQPVPTRK---PTVI--RIPAKPGKCLHEEPQSPPP 553

  Fly   384 IGGHLPPG--YSIPSG-----------------YAGS------ETPPSP----------PMPKGP 413
            :....|.|  ||:.||                 .:||      ..||.|          |.|||.
  Rat   554 LPAEKPVGNTYSVASGRLSNSDRTRNPDLEQASESGSLVQGPPRLPPRPVHGKVIPVWRPPPKGA 618

  Fly   414 P--PPPPPAS----------------------------SG------------------------- 423
            |  ||||..|                            ||                         
  Rat   619 PERPPPPKLSATKSSNKNLPFNRSSSDMDLQRKPCHLASGLSKAKSQVFKNQDPVLPPRPKPGHP 683

  Fly   424 -----------GISLLDVINGKVDALALSNG---------------CQ----------------- 445
                       ||:..|:::.....|:...|               |:                 
  Rat   684 LYRKYMLSVPHGIANEDIVSQNPTELSCKRGDVLVILKQAENNYLECRRGEGTGRVHPSQMKIVT 748

  Fly   446 -------------GYMEEEV---VPYAVALYDFDGIEPGDLSFREGEKIYLLDHPTPEWLRGRTR 494
                         |:.::.|   .|:||||:||...:..|||...||.:|||:....||.||:.|
  Rat   749 PLDEHPRSRPNGSGHTQKPVDSGAPHAVALHDFPAEQADDLSLTSGEIVYLLEKIDAEWYRGKCR 813

  Fly   495 SGCEGIFPINYVD--IKVPLGATGGAAAAPTASAAAPSPSPSQQQLPTALCLYHFPGEVEGDLAL 557
            :. .||||.|||.  :.:|.|.:|...:..:..|..          ...:..:.:.|:.:.:|:.
  Rat   814 NQ-TGIFPANYVKVVVDIPEGRSGKRESFSSHCAKG----------QRCIARFEYIGDQKDELSF 867

  Fly   558 QENELVTVLYRINEDWLYGEVAGRQGQFPANFLDQV 593
            .|.|::.:...:||:|..||:..|.|.||.||::.|
  Rat   868 SEGEVIVLTGYVNEEWGRGEIRDRTGIFPLNFVELV 903

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(3)05822NP_652051.1 SH3 452..506 CDD:214620 26/56 (46%)
SH3 540..591 CDD:473055 15/50 (30%)
Sh3d19XP_006232845.1 PHA03247 <307..684 CDD:223021 83/407 (20%)
SH3 694..743 CDD:473055 6/48 (13%)
SH3 774..825 CDD:473055 25/51 (49%)
SH3_Eve1_3 850..900 CDD:212750 14/49 (29%)
SH3 946..995 CDD:473055
SH3_Eve1_5 1015..1064 CDD:212752
Blue background indicates that the domain is not in the aligned region.

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