DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment l(3)05822 and Sh3d19

DIOPT Version :9

Sequence 1:NP_001262702.1 Gene:l(3)05822 / 47260 FlyBaseID:FBgn0010877 Length:600 Species:Drosophila melanogaster
Sequence 2:XP_006501609.3 Gene:Sh3d19 / 27059 MGIID:1350923 Length:1211 Species:Mus musculus


Alignment Length:972 Identity:186/972 - (19%)
Similarity:287/972 - (29%) Gaps:436/972 - (44%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 SRPAPAPPGSRGQSAAAGANASLEQLRLQLQQQHLQQQQGAGGGLQKLTIKLP------------ 57
            :|.:||.||.||     ||:...|..|.:.:::.|::::..||..:..:..||            
Mouse   131 ARSSPAVPGLRG-----GASPMAEGRRREDEEEELRERRELGGPRRARSRALPGHSAADRNERHK 190

  Fly    58 ----PPPKGPLQS------QHKRTTV--------------------------------------- 73
                ...:|||.|      :..||.:                                       
Mouse   191 PEHRSSSQGPLSSIRAVIKRSSRTCIQSELHRDRRRPEITIVAAEPLRPASWFPGAPPPGLGFPS 255

  Fly    74 -----------------------------------SNNNNGSLFDEPTGGTSITRKFPQ------ 97
                                               :||||.:.....|..::....||:      
Mouse   256 TPGAGPWRPNDLVPAELPPSYEQVIKEINQVQVNATNNNNAAATPRSTITSATQTDFPEDIDSDP 320

  Fly    98 --ARYTPATNWDDDPFGGGSN--------------------GNDRFKKMPPPRPPPPKVL--VNG 138
              ....|.......|.....|                    .|....:.|.|||.....|  |..
Mouse   321 PPTLQAPLKPLQPSPAASAGNLPPGVAPLIVFDICEEQTCPENPSATRCPVPRPRSKSNLRPVAR 385

  Fly   139 QNMTKSNSSMASAVT-----------GGTGRL----MSNIFHRKKSTST--ASAAASKAAAENRV 186
            ...:|..:|..|.||           ..|..|    |.||.:.::|.:|  :...|.:......:
Mouse   386 DANSKEKNSQKSPVTPREDWPPHCLLDSTCNLDSQAMMNIMNTEQSQNTIVSRIKAFEGQTNTEI 450

  Fly   187 YGL-----------------SSGN--AGATPSNNSSSSASSAAFSNVDWNAAWNTATTTTTTTSS 232
            .||                 |||.  ....|:.|.:|             ..|:|........:|
Mouse   451 PGLPKKPEIIPRTIPPKPAVSSGKPLVAPKPAANRAS-------------GEWDTWAENRLKVTS 502

  Fly   233 SSHSSHYASQQTADAQLISFDSPPSSPT--FTQKSNSD-------CVSVD--------------- 273
            ....:.|:|.|.|....::....|..||  .|:..|.:       ..|.|               
Mouse   503 REGLTPYSSPQEAGITPVTKPELPKKPTPGLTRSVNHETSGGRPMAESPDTGKKIPTPAPRPLLP 567

  Fly   274 --SFSSDS------------------------NFSS-----PNNGSVSQPES---------GFED 298
              |.|:|:                        .|.|     |:|..|..|:|         .|:|
Mouse   568 KKSASTDAPPYPSIPPKLVSAPPRLSVASQAKAFRSLGEGLPSNPPVPAPQSKALGDIDLISFDD 632

  Fly   299 DYHRSRPSTQSPLDPWEAVDSVGLGGVDSFGSAPVRQTYQVQSRGSDNPLCNGKSLLP-PTQSLT 362
            |.   .|::.||.:             :..||..|...:|:.::   ......:::.| ||:.  
Mouse   633 DV---LPTSGSPAE-------------EPTGSETVLDPFQLPTK---TEATKERAVQPAPTRK-- 676

  Fly   363 MPTIIKPKISQKP-----KAPKPPPFIGGHLPPG--YSIPSG-------------YAGSET---- 403
             ||:|  :|..||     :.|:.||.:....|.|  :|..||             ...||:    
Mouse   677 -PTVI--RIPAKPGKCLHEEPQSPPPLPAEKPVGNTHSAVSGRPSHSDRTRNPELEQASESGGLV 738

  Fly   404 ------PPSP----------PMPKGPP--PPPP--PAS--------------------------S 422
                  ||.|          |.|||.|  ||||  |||                          |
Mouse   739 QGPPRLPPRPVHGKVIPVWRPPPKGAPERPPPPKLPASKSSNKNLPFNRSSSDMDLQKKQSHFVS 803

  Fly   423 G------------------------------------GISLLDVINGKVDALALSNG-------- 443
            |                                    ||:..|:::.....|:...|        
Mouse   804 GLSKAKSQIFKNQDPVLPPRPKPGHPLYRKYMLSVPHGIANEDIVSRNPTELSCKRGDVLVILKQ 868

  Fly   444 -------CQ------------------------------GYMEEEV---VPYAVALYDFDGIEPG 468
                   ||                              |:.::.|   .|:||||:||...:..
Mouse   869 AENNYLECQRGEGTGRVHPSQMKIVTPLDERPRGRPNDSGHSQKPVDSGAPHAVALHDFPAEQAD 933

  Fly   469 DLSFREGEKIYLLDHPTPEWLRGRTRSGCEGIFPINYVD--IKVPLGATGGAAAAPTASAAAPSP 531
            |||...||.:|||:....||.||:.|:. .|:||.|||.  :.:|.|.:|...:..:..|..   
Mouse   934 DLSLTSGEIVYLLEKIDAEWYRGKCRNQ-TGVFPANYVKVIVDIPEGRSGKRESFSSHCAKG--- 994

  Fly   532 SPSQQQLPTALCLYHFPGEVEGDLALQENELVTVLYRINEDWLYGEVAGRQGQFPANFLDQV 593
                   |..:..:.:.|:.:.:|:..|.|::.:...:||:|..||:..|.|.||.||::.|
Mouse   995 -------PRCVARFEYIGDQKDELSFSEGEVIILTEYVNEEWGRGEIRDRSGIFPLNFVELV 1049

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(3)05822NP_001262702.1 SH3 452..506 CDD:214620 25/56 (45%)
SH3 540..591 CDD:302595 15/50 (30%)
Sh3d19XP_006501609.3 PHA03247 <50..375 CDD:223021 36/248 (15%)
PTZ00449 <245..705 CDD:185628 84/496 (17%)
SH3_Eve1_1 840..889 CDD:212748 7/48 (15%)
SH3 920..971 CDD:388381 24/51 (47%)
SH3_Eve1_3 996..1046 CDD:212750 14/49 (29%)
SH3 1086..1135 CDD:388381
SH3 1155..1204 CDD:388381
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0006195
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X6217
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
33.000

Return to query results.
Submit another query.