DRSC/TRiP Functional Genomics Resources

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Protein Alignment l(3)05822 and Ncf4

DIOPT Version :9

Sequence 1:NP_001262702.1 Gene:l(3)05822 / 47260 FlyBaseID:FBgn0010877 Length:600 Species:Drosophila melanogaster
Sequence 2:NP_032703.2 Gene:Ncf4 / 17972 MGIID:109186 Length:339 Species:Mus musculus


Alignment Length:260 Identity:61/260 - (23%)
Similarity:91/260 - (35%) Gaps:76/260 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   334 RQTYQVQSRGSDNPLCNGKSLLPPTQSL-TMPTIIKPKISQKPKAPKPPPFIGGHLPPGYSIP-- 395
            ||.|.:||:..:......|: .|.|.|| |:|..:.....|: .|....|.:..::....|:|  
Mouse    60 RQFYALQSKLEERFGPESKN-SPFTCSLPTLPAKVYMGAKQE-IAETRIPALNAYMKNLLSLPVC 122

  Fly   396 -------------SGYAGSETP-------PSPPMPKGPPPPPPPASSGGISLLDVINGKVDALAL 440
                         |.|...:.|       |.....||..|      .|.|               
Mouse   123 VLMDPDVRIFFYQSAYDAEQVPQALRRLRPRTRKIKGVSP------QGAI--------------- 166

  Fly   441 SNGCQGYMEEEVVPYAVALYDFDGIEPGDLSFREGEKIYLLDHPTPEWLRGRTRSGCEGIFPINY 505
                   |:....|.|.||:||.|....:|||:.|:.|:||.....:||.| |..|..||||.::
Mouse   167 -------MDRMEAPRAEALFDFTGNSKLELSFKAGDVIFLLSKINKDWLEG-TSQGATGIFPGSF 223

  Fly   506 VDIKVPLGATGGAAAAPTASAAAPSPSPSQQQLPTALCLYHF--PGEVEGDLALQENELVTVLYR 568
            |.|.                    ...|..:.....|..|.:  .|:...|:|::|:...|.|::
Mouse   224 VKIL--------------------KDFPEDEDTTNWLRCYFYEDTGKTIKDIAVEEDLSSTPLFK 268

  Fly   569  568
            Mouse   269  268

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(3)05822NP_001262702.1 SH3 452..506 CDD:214620 23/53 (43%)
SH3 540..591 CDD:302595 8/31 (26%)
Ncf4NP_032703.2 PX_p40phox 19..141 CDD:132792 19/82 (23%)
Phosphatidylinositol 3-phosphate binding. /evidence=ECO:0000250 58..60 61/260 (23%)
Phosphatidylinositol 3-phosphate binding. /evidence=ECO:0000250 92..94 0/1 (0%)
SH3_p40phox 174..227 CDD:212802 23/53 (43%)
PB1_P40 238..329 CDD:99721 8/31 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
10.960

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