DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dmGlut and Slc17a6

DIOPT Version :9

Sequence 1:NP_620115.2 Gene:dmGlut / 47253 FlyBaseID:FBgn0010497 Length:496 Species:Drosophila melanogaster
Sequence 2:NP_445879.1 Gene:Slc17a6 / 84487 RGDID:620531 Length:582 Species:Rattus norvegicus


Alignment Length:499 Identity:161/499 - (32%)
Similarity:249/499 - (49%) Gaps:47/499 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 FVIPQRVILAIMGFLAILNAYTMRVCLSQAITVLVVKKNSTDDDSEAICEPDDIDEGTSV---GG 76
            |.:|:|.|:|||..|....::.:|..|..||..:|  .|||            |..|..|   ..
  Rat    65 FGLPRRYIIAIMSGLGFCISFGIRCNLGVAIVDMV--NNST------------IHRGGKVIKEKA 115

  Fly    77 DFEWSEELQGLILSSFYIGYIVTHIPGGLLAEKFGGKWTLGLGILSTAVFTMLTPLA--INKGDS 139
            .|.|..|..|:|..||:.|||:|.||||.:|.:.......|..||.|:...||.|.|  ::.|  
  Rat   116 KFNWDPETVGMIHGSFFWGYIITQIPGGYIASRLAANRVFGAAILLTSTLNMLIPSAARVHYG-- 178

  Fly   140 DWLIVTRVLMGLGEGTTFPALSVLLAAWVPANERGKLGALVLGGGQVGTIMGNLLSGVFIDAYGW 204
             .:|..|:|.||.||.|:||...:.:.|.|..||.:|......|...|.::...|:|:.:...||
  Rat   179 -CVIFVRILQGLVEGVTYPACHGIWSKWAPPLERSRLATTSFCGSYAGAVIAMPLAGILVQYTGW 242

  Fly   205 EFVFYFFGGLGVVWFAIFMFLCYSDPTSHPFIKPSEREYLVKEIGTISRN----EDLPPTPWKAI 265
            ..|||.:|..|:||:..::.:.|..|..||.|...||.|:.:.||. |.|    .:...|||:..
  Rat   243 SSVFYVYGSFGMVWYMFWLLVSYESPAKHPTITDEERRYIEESIGE-SANLLGAMEKFKTPWRKF 306

  Fly   266 LTNLPMFALVAAQIGHDWGFYIMVTDLPKYMADVLQFSIKANGLYSSLPYVMMWIVSVGSGFVAD 330
            .|::|::|::.|.....|.||:::...|.|..:|..|.|...|:.|::|:::|.|:....|.:||
  Rat   307 FTSMPVYAIIVANFCRSWTFYLLLISQPAYFEEVFGFEISKVGMLSAVPHLVMTIIVPIGGQIAD 371

  Fly   331 WMIRRGVLSTTNTRKVMT--GLAAFGPAIFMVGASYAGCDRVLVVVLFTICMGLMGAYYAGMKLS 393
            ::..:.:||||..||:|.  |.......:.:||.|:.   |.:.:....:.:|..|...:|..::
  Rat   372 FLRSKQILSTTTVRKIMNCGGFGMEATLLLVVGYSHT---RGVAISFLVLAVGFSGFAISGFNVN 433

  Fly   394 PLDMSPNYAGTLMAITNGIGAITGVITPYLVGVMTPNASLLEWRLVFWVAFGVLCFTAVIYCIWA 458
            .||::|.||..||.|:||:|.::|::.|.:||.||.|.|..||:.||.:|..|.....:.|.::|
  Rat   434 HLDIAPRYASILMGISNGVGTLSGMVCPIIVGAMTKNKSREEWQYVFLIAALVHYGGVIFYALFA 498

  Fly   459 SGEVQPFNNAPIQPRSVDFEAQERKVG-------GEKTSGLEQS 495
            |||.||:.:..        |..|.|.|       .|:|..:.|:
  Rat   499 SGEKQPWADPE--------ETSEEKCGFIHEDELDEETGDITQN 534

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dmGlutNP_620115.2 2A0114euk 25..463 CDD:129972 147/448 (33%)
MFS 77..458 CDD:119392 129/388 (33%)
Slc17a6NP_445879.1 2A0114euk 70..511 CDD:129972 152/469 (32%)
MFS 75..498 CDD:119392 143/443 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166342604
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2532
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000034
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.740

Return to query results.
Submit another query.