DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dmGlut and liz1

DIOPT Version :9

Sequence 1:NP_620115.2 Gene:dmGlut / 47253 FlyBaseID:FBgn0010497 Length:496 Species:Drosophila melanogaster
Sequence 2:NP_001342731.1 Gene:liz1 / 2540342 PomBaseID:SPBC2G2.01c Length:514 Species:Schizosaccharomyces pombe


Alignment Length:487 Identity:100/487 - (20%)
Similarity:174/487 - (35%) Gaps:118/487 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 TQQPQWGISLSRYFVIPQRVILAIMGFLAILNAYTMRVCLSQAITVLVVKKNSTDDDSEAICEPD 66
            |..|.:|::     .:.|::::.|..|:.   :|   .|:|..|       |..|..|.......
pombe    10 TFSPYYGLN-----KVEQKLLIKIDWFIL---SY---CCVSYFI-------NYLDRSSINNAYLS 56

  Fly    67 DIDEGTSVGGDFEWSEELQGLILSSFYIGYIVTHIPGGLLAEKFGGK---------WTLGLGILS 122
            .:.|...:.|:     |||.:.: .|..|||:..:||....::...:         |.| :.|.|
pombe    57 GMQEDLKMHGN-----ELQDINV-VFTCGYIIGQLPGSYALQRVPARLWFSVMNILWGL-MTIFS 114

  Fly   123 TAVFTMLTPLAINKGDSDWLIVTRVLMGLGEGTTFPALSVLLAAWVPANERGKLGALVLGGGQVG 187
            .||.::..           |::.|..|.:.|.:||.....:|.||...:|..|...:....|.||
pombe   115 FAVHSVRA-----------LMILRFFMAVAEASTFAGTHYILGAWYKESELCKRAGIFSASGLVG 168

  Fly   188 TIMGNLLSGVFIDAY-------GWEFVFYFFGGLGV--VWFAIFMFLCYSDPTSHPFIKPSEREY 243
            |:....|......:.       ||.::|...|.|.:  ..:.:|:|....:.|..|:....|:|.
pombe   169 TMFAGYLQTAVHSSLNGKGGLSGWRWLFIIDGILTIPLSLYGLFLFPDVPETTKAPYFTEQEKEL 233

  Fly   244 LVKEIGTISRNEDLPPTPWKAILTNLPMFALVAAQIGHDWGFY------IMVTDLPKYMADVL-- 300
            ..|.         ||..|.|.     |:.......|...|..|      |...:......:||  
pombe   234 SFKR---------LPARPKKK-----PLTLKAIKDIVRSWRIYGLCILWIFSGETQAIAVNVLMG 284

  Fly   301 -------QFSIKANGLYSSLPYVMMWIVSVGSGFVAD-------WMIRRGVLSTTNTRKVMTGLA 351
                   :||:.....|.::...:..:.::|:..::|       |..  |:.....|....|.|.
pombe   285 QWMKWSNKFSVAQINNYPTVITAVGVVSTLGASVISDKLAGNPRWPF--GLFLCVITTVSATILL 347

  Fly   352 AFGP-------AIFMVGASYAG-----------C-----DRVLVVVLFTICMGLMGAYYAGMKLS 393
            |:..       |.|..|.:|||           |     :|.:||.|..:|..:...::|.: :.
pombe   348 AWNVPDGAKFFAYFASGCTYAGQAVWFSWANDICRDNDQERGVVVFLMNMCQNIWHIWWAPI-MY 411

  Fly   394 PLDMSPNYAGTL--MAITNGIGAITGVITPYL 423
            |...:|.:...|  :.:..||..::..|..|:
pombe   412 PNTDTPRFIKGLIGLLVVGGIVFVSSCIVSYM 443

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dmGlutNP_620115.2 2A0114euk 25..463 CDD:129972 96/464 (21%)
MFS 77..458 CDD:119392 85/412 (21%)
liz1NP_001342731.1 MFS_1 37..401 CDD:311564 85/404 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 69 1.000 Domainoid score I2672
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 69 1.000 Inparanoid score I1933
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.050

Return to query results.
Submit another query.