DRSC/TRiP Functional Genomics Resources

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Protein Alignment dmGlut and slc-17.5

DIOPT Version :9

Sequence 1:NP_620115.2 Gene:dmGlut / 47253 FlyBaseID:FBgn0010497 Length:496 Species:Drosophila melanogaster
Sequence 2:NP_505139.1 Gene:slc-17.5 / 184790 WormBaseID:WBGene00017681 Length:530 Species:Caenorhabditis elegans


Alignment Length:468 Identity:111/468 - (23%)
Similarity:219/468 - (46%) Gaps:24/468 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 LAILNAYTMRVCLSQAITVLV-VKKNSTDDDSEAICEPDDIDEGTSV--------GGDFEWSEEL 84
            :|::|.....:......|:|: :.:|.| .:|:.:...||.:..|.:        ||.|.||...
 Worm    58 VALMNTNNATLVEGTESTILMSILENKT-SESQELGGGDDGESCTKLEGKVIKDYGGTFIWSVSW 121

  Fly    85 QGLILSSFYIGYIVTHIPGGLLAEKFGGKWTLGLGILSTAVFTMLTP-LAINKGDSDWLIVTRVL 148
            ||.|:|:.::|..:...|.|:|.::|..:..|.:.||...:.::|.| |:|..|:.. ....|.:
 Worm   122 QGYIVSAAFLGGFIFSYPAGVLVDRFSARHILSVAILMLTIASLLMPVLSIYIGEKG-AFAGRFV 185

  Fly   149 MGLGEGTTFPALSVLLAAWVPANERGKLGALVLGGGQVGTIMGNLL-SGVFIDAYGWEFVFYFFG 212
            ||:.|....|:::.::..|:|.||:....::...|.|:..:.||:| :.:...::||..:||...
 Worm   186 MGISETMLIPSINSMVTKWIPINEKSLAASVFTAGNQLSGMFGNILVAELCASSFGWSSIFYSAS 250

  Fly   213 GLGVVWFAIFMFLCYSDPTSHPFIKPSEREYLVKEIGTISRNEDLPPTPWKAILTNLPMFALVAA 277
            ..|:.|..::.....:.|.:..:|...|.:||...|.....:..:..|||:.:||:...::|:..
 Worm   251 LFGISWLVLWHLTVRNSPHNTRWIHKRELDYLANNIPPKHPSSVVKKTPWRDMLTSKVFWSLMFN 315

  Fly   278 QIGHDWGFYIMVTDLPKYMADVLQFSIKANGLYSSLPYVMMWIVSVGSGFVADWMIRRGVLSTTN 342
            .:..:....::...:|.|..|||...:::||.||::|::...|..:..|::.|.|..:.:||.:.
 Worm   316 SVMGNMMIALIFVYIPVYFKDVLMLDVQSNGFYSAIPHISNLIAKLIWGYLMDKMRHKKILSPSA 380

  Fly   343 TRKVMTGLAAFGPAIFMVGASYAGC-DRVLVVVLFTICMGLMGAYYAGMKLSPLDMSPNYAGTLM 406
            |.|:....:..|.::......|..| .....:||.:......|...:|...|.|.::|::.|||.
 Worm   381 TVKLSQFASMMGISVSCFFLRYMNCATPFYALVLLSSVSAFFGLSISGFYTSLLSIAPSHIGTLT 445

  Fly   407 AITNGIGAITGVITPYLVGVMTPNASLLEWRLVFWVAFGVLCFTAVIYCIWASGEVQPFN----- 466
            ::...||.:..:.||.::.......:..||..|..:.........:|:.::.||:||.::     
 Worm   446 SLATVIGFVGRMFTPLMISYYKTVGTAEEWGHVLLIYVFASATGGIIFLLFGSGDVQNWDYSKRH 510

  Fly   467 -----NAPIQPRS 474
                 ||.:.|:|
 Worm   511 NTARPNALVAPKS 523

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dmGlutNP_620115.2 2A0114euk 25..463 CDD:129972 105/445 (24%)
MFS 77..458 CDD:119392 91/383 (24%)
slc-17.5NP_505139.1 MFS 108..497 CDD:391944 93/389 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2532
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S6027
OMA 1 1.010 - - QHG28615
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000034
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11662
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X142
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
76.870

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