Sequence 1: | NP_524887.2 | Gene: | SrpRalpha / 47251 | FlyBaseID: | FBgn0010391 | Length: | 614 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001329356.1 | Gene: | AT4G30600 / 829183 | AraportID: | AT4G30600 | Length: | 634 | Species: | Arabidopsis thaliana |
Alignment Length: | 669 | Identity: | 283/669 - (42%) |
---|---|---|---|
Similarity: | 395/669 - (59%) | Gaps: | 90/669 - (13%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MLDFVVIFTKGGVVLWHSNASGNSF-ASCINSLIRGVILEERNTEAKY-YEEDHLAVQFK--LDN 61
Fly 62 ELDLVYAAIFQKVIKLNYLDGFLADMQAAFKEKYGDIRLGDDYDFDREYRRVLSAAEEAS----- 121
Fly 122 AKQVKAP-------------------KTMRSYNESQK------SKKTVASM----------IQDD 151
Fly 152 KKPVEKRVNIQEAPPPSKSQPSSPPTGSPMDKIIMEKRRKLREK----LTPTKKTSPSDSKSSK- 211
Fly 212 ---PEKAGKKPRVWDLGGNSKDAALLDRSRDSPDDVQYQNINS--ELVGTMQG-VIRDLDVESED 270
Fly 271 EADNEDASSEGEAEEQVQSKKGKRGGLLSYFKGIVGAKTMSLADLQPALEKMRDHLISKNVASEI 335
Fly 336 AAKLCDSVAASLDGKQMGTFDSIASQVKEALTESLVRILSPKRRIDIIRDALESKRNGRPYTIIF 400
Fly 401 CGVNGVGKSTNLAKICFWLIENDFNVLIAACDTFRAGAVEQLRTHTRHLNALHPAAKHDGRNMVQ 465
Fly 466 LYEKGYGKDAAGIAMEAIKFAHDTRVDVVLVDTAGRMQDNEPLMRSLSKLIKVNNPDLVLFVGEA 530
Fly 531 LVGNEAVDQLVKFNQSLADYSSNENPHIIDGIVLTKFDTIDDKVGAAISMTYITGQPIVFVGTGQ 595
Fly 596 TYADLKAINVNAVVNSLMK 614 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
SrpRalpha | NP_524887.2 | SRP-alpha_N | 27..268 | CDD:282006 | 78/294 (27%) |
PRK14974 | 258..613 | CDD:237875 | 195/355 (55%) | ||
SRP54_N | 299..374 | CDD:214941 | 35/74 (47%) | ||
SRP | 396..592 | CDD:239389 | 126/195 (65%) | ||
AT4G30600 | NP_001329356.1 | SRP-alpha_N | 28..301 | CDD:397968 | 78/292 (27%) |
SRP54_N | 330..399 | CDD:397149 | 31/68 (46%) | ||
SRalpha_C | 441..632 | CDD:349785 | 130/203 (64%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Domainoid | 1 | 1.000 | 278 | 1.000 | Domainoid score | I406 |
eggNOG | 1 | 0.900 | - | - | E1_COG0552 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 1 | 1.000 | - | - | H2364 | |
Inparanoid | 1 | 1.050 | 454 | 1.000 | Inparanoid score | I382 |
OMA | 1 | 1.010 | - | - | QHG53679 | |
OrthoDB | 1 | 1.010 | - | - | D804839at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0005144 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 1 | 0.900 | - | - | OOG6_100631 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR43134 |
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 1 | 1.000 | - | - | X2595 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 1 | 0.960 | - | - | ||
13 | 12.840 |