DRSC/TRiP Functional Genomics Resources

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Protein Alignment woc and qrich1

DIOPT Version :9

Sequence 1:NP_001097946.1 Gene:woc / 47249 FlyBaseID:FBgn0010328 Length:1703 Species:Drosophila melanogaster
Sequence 2:NP_001007960.1 Gene:qrich1 / 493333 XenbaseID:XB-GENE-1217249 Length:799 Species:Xenopus tropicalis


Alignment Length:820 Identity:219/820 - (26%)
Similarity:334/820 - (40%) Gaps:233/820 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   943 VMQFQNQFARAPLTLDSDLPPSS----------AGSSKSQQQSNRGNKNAAPFPTGLPKRVKLKL 997
            |.|...|.....|:...::.||:          .||.:||......|::.........:..::::
 Frog   144 VQQSPQQVTGQQLSPQLNVHPSNEQPIQVQVQIQGSGQSQTAQTIQNQSLQSQTPSQMQVAQIQV 208

  Fly   998 SHTGKGG---------------------VGGKKSGSGTMLPVISTVQSLASGETEARIGNLTVRR 1041
            .|...|.                     |.|:..|||..      :|..||              
 Frog   209 QHVQAGQQIQPSDMQDDHIQHQQIQAQLVAGQSVGSGIQ------IQQTAS-------------- 253

  Fly  1042 KRGRPRESGTSSPPLSMPGVHPPAQRGRPRKHAVDYSARSPSPTMSGGSSHMGIPVRRNTTTTMD 1106
                     ..||        ||.|:|.||    :...||       .||.:..||::.....  
 Frog   254 ---------ALSP--------PPTQQGSPR----EVERRS-------SSSSVLQPVKKRKVDM-- 288

  Fly  1107 FGPATVTETKIITVPPYPKAVRNVNISCKP----LTVTQGEQCS-----PDVRDCATQTEKDYSN 1162
              |.|::..                ||.:|    |.:.||:|.|     ||              
 Frog   289 --PITLSYA----------------ISGQPVAAVLAIPQGQQQSYVSLRPD-------------- 321

  Fly  1163 KVLIPVPVPIFVPQPMYMYSAPFPVPVPIPLPIPVPIFIPTTRNTAQGILKEIKKIQDKMPEDPL 1227
                     :......::|.|...:..|......:|::....|:.    |.:.......:|.:..
 Frog   322 ---------LLTVDSAHLYGATGTITSPTGETWTIPVYSANARSD----LPQQNITHIAIPPEAY 373

  Fly  1228 EAELLMMAEMVAEEKHESDSDSDNEIKPDPGLVALQYQNSLESVAQQQQQQQVVDVSGAGHNPYG 1292
            .|..:..:..||..|.|.:.|.         :|...::..::::|......|.::         |
 Frog   374 NAVHVTGSPTVAAVKLEEEKDK---------MVKNTHEEVVQTLANSLFPAQFMN---------G 420

  Fly  1293 DDMLQIALKMATGDYDNHHQTSTVDLETSMTANTISSQSPMGHDGMGQMGVHHLDQQHHMLDATQ 1357
            :..:.:|::...|.|.|             ||.|:....|.....:.:....|..||.|.     
 Frog   421 NIHIPVAVQAVAGAYQN-------------TAQTVHIWDPQQQATLHEQVQQHQQQQQHQ----- 467

  Fly  1358 RTARGRKRGVGVVMDPPNRNSRSPVKRQRGGEMDHSALQQQSQQAQQPQEKPDAQMFLKYTF--- 1419
                                                 ||.|:....:||::|..::.|..|.   
 Frog   468 -------------------------------------LQAQAVNEVEPQQQPSPELLLPSTLKPE 495

  Fly  1420 -GVNAWKQWVMTKNADIEKSSMRRRP---------FKTELLQMTADELNYSLCLFVKEVRKPNGT 1474
             |:..||.|..||||::||.|..|..         |:.:|:.....||||.|||..||.|...|.
 Frog   496 EGLQVWKNWAQTKNAELEKDSQNRLAPIGRRQLLRFQEDLISSAVAELNYGLCLMTKEARNMEGE 560

  Fly  1475 EYAPDTIYYLVLGIQQYLYVNGRIDNIFYDPYYERFTECLDEVARKFSVLYNDSQYIV-TRVEEE 1538
            .|..|.:||:.|.||:||..|||:|:||.|.||.:|||.|.||.:.:........|:: :.|.||
 Frog   561 PYDADVLYYIFLCIQKYLCENGRVDDIFSDNYYIKFTEWLHEVLKNYQPRVTPIGYVIPSHVTEE 625

  Fly  1539 HLWECKQLGAHSPHVLLSTLMFFNTKHFNLTTVEEHMQLSFSHIMKHWKRSSQNSKVPGSRNVLL 1603
            .||||||||||||..||:||||||||:|.|.||::|::|:||.:::..|::..|   |..::..:
 Frog   626 MLWECKQLGAHSPATLLTTLMFFNTKYFLLKTVDQHIKLAFSKVLRQTKKNPSN---PKDKSTSI 687

  Fly  1604 RFYPPQAGLDANPRKK------KVY-EQQENEENPLRCPVRLYEFYLSKCPESVKTRNDVFYLQP 1661
            | |....|:....::|      .:| ||.||.|||||||::||:|||.|||:|||.|||.|||.|
 Frog   688 R-YLKALGIHQAGQQKGFSITDDMYAEQTENPENPLRCPIKLYDFYLFKCPQSVKGRNDTFYLTP 751

  Fly  1662 ERSCVPDSPVWYSTQALGQDALQRMLHRVKMVKEINIALL 1701
            |....|:||:|||||.:.::.:::||.|:.:::||..|::
 Frog   752 EPVVAPNSPIWYSTQPISREQMEQMLTRILLIREIQEAIV 791

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
wocNP_001097946.1 TRASH 684..721 CDD:214799
zf-FCS 724..762 CDD:283998
DUF3504 1531..1690 CDD:288835 81/166 (49%)
qrich1NP_001007960.1 DUF3504 624..782 CDD:371846 81/161 (50%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D266757at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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