DRSC/TRiP Functional Genomics Resources

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Protein Alignment woc and Zmym6

DIOPT Version :10

Sequence 1:NP_001097946.1 Gene:woc / 47249 FlyBaseID:FBgn0010328 Length:1703 Species:Drosophila melanogaster
Sequence 2:NP_001102151.1 Gene:Zmym6 / 362602 RGDID:1561833 Length:1249 Species:Rattus norvegicus


Alignment Length:1304 Identity:251/1304 - (19%)
Similarity:398/1304 - (30%) Gaps:495/1304 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   631 AETARLDRIESFRRRCADCEADINTDEKQLMWETMDFCNEVCLGSYQRTIGST------------ 683
            |:...||||    :...|...:....|.:|....:...::..|| :|..:.|.            
  Rat    14 AQQGLLDRI----KEEPDDAHEYGPQESELKISAVFSASDTSLG-FQVGLPSPGLSASFPAVPAA 73

  Fly   684 ---CETCKQEVSSIALGKYCVRFGFDVRQFCCAGCLNTFKKGL-------KTCSCCQKDISGGQE 738
               |..|||   .:..|:...|.....:.||..||:.||...:       :||:.|.|||....:
  Rat    74 QVFCFGCKQ---LLRKGQPTYRKAGSAQLFCSMGCVITFSSAVCVPPLPKRTCAHCSKDILNPMD 135

  Fly   739 GFLAPVGDKDQFKDFCSQSCLRRYESMCNPRRKLRTDVCGVCNNQKPVRVEMLLEDREHYFCSNP 803
            .......:....|:|||||||..||.                  :|||                 
  Rat   136 VITTQFENSSLCKEFCSQSCLFSYEL------------------KKPV----------------- 165

  Fly   804 CFSAFKFVSNVNADPCAMCSKYFERRSAESYTIYNEQQSPKVFCSRVCINVYIIVNRHIVSCQWC 868
               ...:.|.::| .|:||.|            ..:..:||        .:|.:.|...:|.:  
  Rat   166 ---VTIYTSGISA-KCSMCQK------------GTDNLAPK--------PLYALGNSSRLSAE-- 204

  Fly   869 KVKKYNFDMIYQIGGPHDQETLTCSINCLTMHGVSCNISARAVTKCDNCSNFNTPQYHLTMSDAS 933
                     :.:......:..|.||||||:.:.:...||:.....|.:|.....|||||.||:.:
  Rat   205 ---------MIETTNDSGRTELFCSINCLSAYRIKTVISSGIQVLCHSCKTAAVPQYHLAMSNGT 260

  Fly   934 MRNFCTYQCVMQFQNQFARAPLTLDSDLPPSSAGSS--KSQQQSNRGNKNAAPFPT--------- 987
            :.:||:..||:.|||.|.: |...:|.|.|.|.|..  .:..||....:..||.|:         
  Rat   261 ICSFCSSNCVLAFQNVFNK-PKGRNSSLAPISQGQEVLSAPMQSAVSARKEAPAPSFSSPISNPA 324

  Fly   988 -----GLPK---RVKLKLS----------------------------HTGKGGVGGKKSG----- 1011
                 .|.|   ::.|.||                            ..||......|..     
  Rat   325 AAALETLAKESHQIALTLSFLKLTCLQCSLLFATKPELLFYKGRMFMFCGKACCDEYKRQNKVKA 389

  Fly  1012 -----------------SGTMLPVISTV-QSLASGETEARIGNL--------------------- 1037
                             ||...|..|.| :.|::.:...|.||.                     
  Rat   390 LCDYCKLQKTIEDTVRFSGVDKPFCSEVCKVLSARDFGERWGNYCKTCSYCLQTSANFVENQLEG 454

  Fly  1038 --------------------TVR----RKRGRPRES----------------------GTSSPPL 1056
                                |.|    :::|:..||                      .:::.|:
  Rat   455 KLQVFCCEDCMSKFTALLYQTARCDACKRQGKLSESLKWRGNIKYFCNLFCVLKFCHQYSANDPI 519

  Fly  1057 SMPGVH---PPAQRGRPRKHAVDYSARSP----SPTMSGGSSHMGIPV---RRNTTTT-MDFGPA 1110
            ....|.   .|||...|:......:..||    :|.::..:|...||.   .|||.:. .|.|| 
  Rat   520 PQRKVFVLPKPAQVIIPKVQTAMTALPSPKIATTPVITSVTSLAKIPALQPSRNTNSVCTDAGP- 583

  Fly  1111 TVTE-TKII------------TVPPYPKAVRNVNISCKPLTVTQGEQCSPDVRDCATQTEKDYSN 1162
              || ||||            ..|..||.::|..|.|||:|.|:...|.|.....|.||:.    
  Rat   584 --TEATKIIGNGSKPAAAERLQSPQAPKLLKNKGILCKPVTQTKATSCRPHTHHVACQTDS---- 642

  Fly  1163 KVLIPVPVPIFVPQPMYMYSAPFPVPVPIPLPIPVPIFIPTTR------NTAQG-------ILKE 1214
                  |:|....:.   |.:|                 |..|      :|...       |:..
  Rat   643 ------PLPDGKNEE---YDSP-----------------PAKRRRVDFFHTCNADYIKFGFIICS 681

  Fly  1215 IKKIQDKMPEDPLEAELLMMAEM--VAEEKHESDSDSDNEIKPDPGLVALQYQNSLESVAQQQQ- 1276
            ..|.....|:..:..|:|....:  |:...|.....||.|.||    :....:.|||...|... 
  Rat   682 GSKESSPSPQCVICGEILPSESVMPVSLSNHLKAKHSDLENKP----IDFFEEKSLEMECQNSSL 742

  Fly  1277 ------QQQVVDVSG------AGHN-----------PYGDDMLQIALKMATGDYDNHHQTSTVDL 1318
                  ::.:|..|.      |..|           ||..:|....|..:.||     :..|:.|
  Rat   743 KKCLLVEESLVKASYLIAFQIAARNKPFSIAEELIKPYLVEMCSEVLGSSAGD-----KMKTIPL 802

  Fly  1319 ETSMTANTISSQSPMGHDGMGQMGVHHLDQQHHMLDATQRTARGRKRGVGVVMDPPNRNSRSPVK 1383
            ..|.....|...|.              |.:..:|                              
  Rat   803 SNSTIGCRIKKLSE--------------DIEDQLL------------------------------ 823

  Fly  1384 RQRGGEMDHSALQQQSQQAQQPQEKPDAQMFLKYTFGVNAWKQWVMTKNADIEKSSMRRRPFKTE 1448
             |:..|....||     |..:..|..|..:.|.|.       ::|.....|:::..:    |.||
  Rat   824 -QKVRESRWFAL-----QVDESSEVTDVPLLLCYV-------RFVDYDCGDVKEELL----FCTE 871

  Fly  1449 LLQMTAD--------------ELNYSLCL-FVKEVRKPNGTEYAPDTIYYLVLGIQQYLYVNGRI 1498
            :...:.|              .|:::.|: |..:     |.....|...:|...||:........
  Rat   872 MPSPSTDLKVFELINQYIDSRSLHWNHCVGFCTD-----GAASLTDECSHLRSKIQEIAKNTVTF 931

  Fly  1499 DNIFYDPYY---ERFTECLDEVARKFSVLYNDSQYIVTRVEEEHLWE--CKQLGAHSPHV----- 1553
            .:.|....:   |:.:.||.|:..:.|.:.:   ::.....:..:..  |:::|  |.||     
  Rat   932 THCFIHREHLAAEKLSPCLHEILLQLSQILS---FVKNSASDSRMLTILCEEVG--SGHVSLPLS 991

  Fly  1554 ----------LLSTL--------MFFNTKHFNLTTV---EE------HMQLSFSHIMKHWKRSSQ 1591
                      :|:.|        :|.|.||.:|...   ||      ::...||.|.|      .
  Rat   992 AEVRWLARGRILTRLFELRHEIEIFLNQKHSDLARYFHDEEWVAKLAYLADIFSLINK------L 1050

  Fly  1592 NSKVPGSRNVLLRFYPPQAGLDANPRKKKVYEQ---------QENEENPLRCPVRLYEFYLSKCP 1647
            ||.:.|:.......|          .|.:::::         |||:.:..    .|:..:|....
  Rat  1051 NSSLQGTMTTFFSLY----------NKVEIFKKRLKMWLKRAQENDYDMF----PLFSEFLDSSD 1101

  Fly  1648 ESVK 1651
            .||:
  Rat  1102 VSVR 1105

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
wocNP_001097946.1 MDN1 <7..>419 CDD:444083
TRASH 684..721 CDD:214799 12/36 (33%)
zf-FCS 724..762 CDD:428958 14/37 (38%)
DUF3504 1531..1692 CDD:463430 30/164 (18%)
Zmym6NP_001102151.1 zf-FCS 118..159 CDD:428958 14/40 (35%)
Blue background indicates that the domain is not in the aligned region.

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