DRSC/TRiP Functional Genomics Resources

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Protein Alignment woc and Zmym5

DIOPT Version :10

Sequence 1:NP_001097946.1 Gene:woc / 47249 FlyBaseID:FBgn0010328 Length:1703 Species:Drosophila melanogaster
Sequence 2:NP_001419957.1 Gene:Zmym5 / 305911 RGDID:1306353 Length:628 Species:Rattus norvegicus


Alignment Length:446 Identity:92/446 - (20%)
Similarity:156/446 - (34%) Gaps:126/446 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   612 QNSPTKRTDGSVVARTVEEAETA-------RLDRIESFRR----------RCADCEADINTDEKQ 659
            :|| ||..|..:.:.:..:.:||       |:|..:.|..          .|....|....::||
  Rat   118 KNS-TKTVDFPIASLSRSKTKTAVGPFNPGRIDITDEFHNGRFAVHPNPDSCISQSASFPRNQKQ 181

  Fly   660 -----------LMWETMDFCNEVCLGSYQRTIGSTCETCKQEVSSIALGKYCVRFGFDVRQFCCA 713
                       |..:.....|:.......:.|   |..||..:..   |:...:.......||..
  Rat   182 QGADSLSPVASLPKQNFQPSNQHLTKPANKII---CANCKNPLQK---GQTAYQRKGSAHLFCST 240

  Fly   714 GCLNTF--KKGLKTCSC-CQKDISGGQEGFLAPVGDKDQFKDFCSQSCLRRYESMCNPRRKLRT- 774
            .||::|  |:..||.|. |:||........:.||......::|.|.| ...||:..:.|:::.| 
  Rat   241 TCLSSFSHKRTRKTRSAMCKKDSPVKPTTIVPPVESSKSLREFHSAS-PSPYENCQSLRKEVFTK 304

  Fly   775 DVCGVCNNQKPVRVEMLLEDREHYFCSNPCFSAFKFVSNVNADPCAMCSKYFERRSAESYTIYNE 839
            ..|.:||....||.|:.:....|..|||.||:.::..:.:..:.|..||||..:.:..|..|..:
  Rat   305 SRCIICNKLGEVRHEISVNSITHKLCSNSCFNEYRLTNGLIMNCCEQCSKYMPKSTGHSILITGQ 369

  Fly   840 QQSPKVFCSRVCINVY-----------IIVNRHIVSCQWCKVKKYNFDMIYQ----IGG-----P 884
            |   |.||...|.:.|           ::.||     :...:::.|...:|:    :.|     |
  Rat   370 Q---KRFCCLSCADEYKEIMEAKSKILLLQNR-----KRNAIREENEKKLYESSKTLSGNTGEIP 426

  Fly   885 HDQETLTCSINCLTMHGVSCNISARAVTKCDNCSNFNTPQYHLTMSDASMRNFCTYQCVMQFQNQ 949
            ..:|.::..|..    ...|::...:..:     |.|.|              |:...|      
  Rat   427 EKKEKISEIIKV----AADCSLDTSSEER-----NVNLP--------------CSVAAV------ 462

  Fly   950 FARAPLTLDSDLPPSSAGSSKSQQQSNRGNKNAAPF---------PTGLPKRVKLK 996
                              |.|.|:|  .|:||:..|         |...|:.:.:|
  Rat   463 ------------------SDKFQEQ--LGDKNSEEFDASVVLSLDPGSWPRILNMK 498

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
wocNP_001097946.1 MDN1 <7..>419 CDD:444083
TRASH 684..721 CDD:214799 9/38 (24%)
zf-FCS 724..762 CDD:428958 11/38 (29%)
DUF3504 1531..1692 CDD:463430
Zmym5NP_001419957.1 TRASH 214..250 CDD:214799 9/38 (24%)
zf-FCS 304..338 CDD:428958 12/33 (36%)
zf-FCS 344..382 CDD:428958 12/40 (30%)
ZnF_TTF 529..>596 CDD:214739
Blue background indicates that the domain is not in the aligned region.

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