DRSC/TRiP Functional Genomics Resources

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Protein Alignment woc and qrich1l

DIOPT Version :9

Sequence 1:NP_001097946.1 Gene:woc / 47249 FlyBaseID:FBgn0010328 Length:1703 Species:Drosophila melanogaster
Sequence 2:XP_002932229.1 Gene:qrich1l / 100497567 XenbaseID:XB-GENE-5995297 Length:664 Species:Xenopus tropicalis


Alignment Length:635 Identity:191/635 - (30%)
Similarity:283/635 - (44%) Gaps:132/635 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly  1169 PVPIFVPQPMYMYSAPFPV---------PVPIPLPIPVPIFIPTTR--------NTAQGILKEIK 1216
            |:.::..:..|.|.....|         |:..||...|...:|..:        :..||...:|:
 Frog    49 PISVYQQRNHYFYMDSTDVAGSLLELARPIASPLQHTVSSGVPLDQHHIPVHHVSLRQGHHVDIQ 113

  Fly  1217 KIQDKMP-EDPLEAELLMMAEMVAEEKHESDSDSDNEIKPDPGL--------------------- 1259
            ..|...| :..:|      .:.|:||:..|...|.|..:..|.|                     
 Frog   114 SNQSAKPMQQQVE------GQPVSEEQSASIVGSSNSQEKRPCLTGLSQPVKKRKFDLPVENCYS 172

  Fly  1260 ---VALQYQNSLESV----AQQQQQ------QQVVDVSGAGHNPYGDDMLQIALKMATGDYDN-- 1309
               .|||..::..:|    .|.|||      |:::.|..:  ..||   |..|...|:....|  
 Frog   173 VNHAALQSASAAAAVLALPVQSQQQAYIPLRQELLTVDSS--QLYG---LVPASTSASSQLPNVE 232

  Fly  1310 ------HHQT---STVDLETSMTANTISSQSPMGHDGMGQMGVHHLDQQHHMLDATQRTARGRKR 1365
                  .|.|   |...:.||:..:|.         |:.|||...:......::.::.....:|.
 Frog   233 SWAIFSAHATCPESQTIMHTSVPQDTC---------GIVQMGEIPMTTSSIKVEESKENFEAKKS 288

  Fly  1366 GV----------GVVMDPPNRNSRSPV-----KRQRG--------GEMDHSALQQQ-SQQAQQPQ 1406
            ..          |..|...|.|...|:     ...||        .::....||.. |:...:.|
 Frog   289 NTEKTVHAPSTSGFPMQLINMNGNIPISLSVQSTARGYQPSKYWDQQVQSEGLQSSPSESHLRLQ 353

  Fly  1407 EKPDAQMFLKYTFGVNAWKQWVMTKNADIEKSS-------MRRRP--FKTELLQMTADELNYSLC 1462
            ...|....||...|...||.|...|||:..|..       .||:|  ||.::|.:...:|||.||
 Frog   354 NNADFPCTLKPEEGALFWKSWAQIKNAETMKEMENKLPCFERRKPIIFKEDILSVPIADLNYGLC 418

  Fly  1463 LFVKEVRKPNGTEYAPDTIYYLVLGIQQYLYVNGRIDNIFYDPYYERFTECLDEVARKFSVLYND 1527
            |..||.||.:|:.|..|.::||.|.:|::::.|.||||:|.|.||.:|.|.|.||.:::....|.
 Frog   419 LMTKEARKHDGSTYDADMLFYLFLCMQKHMFNNNRIDNVFADLYYSKFLEKLHEVLKEWCPRVNP 483

  Fly  1528 SQYIVTR-VEEEHLWECKQLGAHSPHVLLSTLMFFNTKHFNLTTVEEHMQLSFSHIMKHWKRSSQ 1591
            ..||::. :.||.||:|||||||||..||.|||:||||:|.|.|||:|.||:||.|.|      |
 Frog   484 FGYIISSCITEEMLWDCKQLGAHSPTTLLFTLMYFNTKYFILKTVEQHSQLAFSKITK------Q 542

  Fly  1592 NSKVPG---SRNVLLRFY----PPQAGLDANPRKKKVYEQQENEENPLRCPVRLYEFYLSKCPES 1649
            ..|.||   .:|..:||.    ..|:||...  ::...||.||.:|||:||::||:||..|||:.
 Frog   543 TRKNPGIGKDKNCTIRFLRLYGQVQSGLKVT--EETYVEQLENPDNPLQCPIKLYDFYRFKCPQG 605

  Fly  1650 VKTRNDVFYLQPERSCVPDSPVWYSTQALGQDALQRMLHRVKMVKEINIA 1699
            ::...|.|||.||....|:||:|||.|.:.::.:::||.|:.:||::..|
 Frog   606 MRGPTDAFYLVPEPVVAPNSPIWYSGQPVNKEVMEQMLTRILLVKDVQEA 655

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
wocNP_001097946.1 TRASH 684..721 CDD:214799
zf-FCS 724..762 CDD:283998
DUF3504 1531..1690 CDD:288835 76/166 (46%)
qrich1lXP_002932229.1 DUF3504 494..648 CDD:371846 76/161 (47%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D266757at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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