DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpS14b and MRPS18

DIOPT Version :10

Sequence 1:NP_536352.1 Gene:RpS14b / 47219 FlyBaseID:FBgn0004404 Length:151 Species:Drosophila melanogaster
Sequence 2:NP_014093.1 Gene:MRPS18 / 855410 SGDID:S000005250 Length:217 Species:Saccharomyces cerevisiae


Alignment Length:127 Identity:34/127 - (26%)
Similarity:55/127 - (43%) Gaps:27/127 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 SFNDTFVHVTDLSGRETIARVTG--GMKVKADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLR 98
            ::|||.::..:|..:..|:..||  |.: ||.|.|..  ||...:..:.|..|...:....|:: 
Yeast   107 TYNDTMLYYLNLPQKVKISLSTGCLGFR-KAARGEYE--AAFQTSGRMFELIKEKNMLNKDIEV- 167

  Fly    99 ATGGNKTKTPGPGAQSALRALARSSMKIGR-----IEDVTPIPSDSTRRK-GGRRG---RRL 151
                 .....|.|..:.:.||      :|:     ::.|..| ||:|:.| ||.|.   |||
Yeast   168 -----VMDDFGKGRAAFISAL------VGKEGASVVKKVVKI-SDATKLKFGGVRSPKMRRL 217

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpS14bNP_536352.1 PTZ00129 1..140 CDD:185465 26/110 (24%)
MRPS18NP_014093.1 Ribosomal_S11 107..215 CDD:444843 31/123 (25%)

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