DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpS14b and NFD3

DIOPT Version :10

Sequence 1:NP_536352.1 Gene:RpS14b / 47219 FlyBaseID:FBgn0004404 Length:151 Species:Drosophila melanogaster
Sequence 2:NP_564385.1 Gene:NFD3 / 840071 AraportID:AT1G31817 Length:314 Species:Arabidopsis thaliana


Alignment Length:127 Identity:35/127 - (27%)
Similarity:55/127 - (43%) Gaps:18/127 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 VAHIYASFNDTFVHVTDLSGRETIARVTGGM-KVKADRDEASPYAAMLAAQDVAEKCKTLGITAL 93
            :.||....|:|||.|||..|.......:|.: .:|..| :.:.|.|...|:::..:.|.:|:.::
plant   195 IIHIKMLRNNTFVTVTDSKGNVKCKATSGSLPDLKGGR-KMTNYTADATAENIGRRAKAMGLKSV 258

  Fly    94 HIKLRATG--GNKTKTPGPGAQSALRALARSSMKIGRIEDVTPIP--SDSTRRKGGRRGRRL 151
            .:|:....  |.|.|        |:.|. |......| .|..||.  .|:||:  ...|.||
plant   259 VVKVNGFTHFGKKKK--------AIIAF-RDGFTNSR-SDQNPIVYIEDTTRK--AHNGCRL 308

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpS14bNP_536352.1 PTZ00129 1..140 CDD:185465 30/114 (26%)
NFD3NP_564385.1 Ribosomal_S11 195..314 CDD:444843 35/127 (28%)

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