DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpS14b and rps1401

DIOPT Version :10

Sequence 1:NP_536352.1 Gene:RpS14b / 47219 FlyBaseID:FBgn0004404 Length:151 Species:Drosophila melanogaster
Sequence 2:NP_594187.1 Gene:rps1401 / 2540817 PomBaseID:SPAC3H5.05C Length:139 Species:Schizosaccharomyces pombe


Alignment Length:135 Identity:112/135 - (82%)
Similarity:126/135 - (93%) Gaps:0/135 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 LGPQVRDGEIVFGVAHIYASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAAQDV 81
            :|||:|.||:|||||||:|||||||||:|||:|:|||.|||||||||.||||:|||||||||||.
pombe     5 VGPQIRSGELVFGVAHIFASFNDTFVHITDLTGKETIVRVTGGMKVKTDRDESSPYAAMLAAQDA 69

  Fly    82 AEKCKTLGITALHIKLRATGGNKTKTPGPGAQSALRALARSSMKIGRIEDVTPIPSDSTRRKGGR 146
            |.|||.:||||||||:|||||..|||||||||:|||||||:.|:|||||||||||:|||||||||
pombe    70 AAKCKEVGITALHIKIRATGGTATKTPGPGAQAALRALARAGMRIGRIEDVTPIPTDSTRRKGGR 134

  Fly   147 RGRRL 151
            |||||
pombe   135 RGRRL 139

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpS14bNP_536352.1 PTZ00129 1..140 CDD:185465 99/122 (81%)
rps1401NP_594187.1 Ribosomal_S11 2..128 CDD:444843 99/122 (81%)

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