DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpS14a and mrps11

DIOPT Version :9

Sequence 1:NP_524884.1 Gene:RpS14a / 47218 FlyBaseID:FBgn0004403 Length:151 Species:Drosophila melanogaster
Sequence 2:NP_001135722.1 Gene:mrps11 / 100216303 XenbaseID:XB-GENE-970920 Length:195 Species:Xenopus tropicalis


Alignment Length:118 Identity:31/118 - (26%)
Similarity:59/118 - (50%) Gaps:9/118 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 VAHIYASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAAQDVAEKCKTLGITALH 94
            :||:.|::|:|.:.||.... :::.|.:.|.:...:..:::..||..|.  ::...|.:|....|
 Frog    86 IAHVKATYNNTHIQVTSHES-QSLVRTSCGTEGFKNAKKSTAVAAQTAG--ISAAAKAIGKGVSH 147

  Fly    95 IKLRATGGNKTKTPGPGAQSALRALARSSMKIGRIEDVTPIPSDSTRRKGGRR 147
            :::...|      .|||..||::.|....:::..|.|.||||.:..|.:..||
 Frog   148 VRVVVKG------LGPGRLSAIKGLTMGGLEVISITDNTPIPHNGCRPRKARR 194

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpS14aNP_524884.1 PTZ00129 1..140 CDD:185465 28/109 (26%)
mrps11NP_001135722.1 Ribosomal_S11 86..194 CDD:294237 29/116 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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