DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Klp54D and kif3cb

DIOPT Version :9

Sequence 1:NP_001303355.1 Gene:Klp54D / 47216 FlyBaseID:FBgn0263076 Length:760 Species:Drosophila melanogaster
Sequence 2:NP_001017849.2 Gene:kif3cb / 550547 ZFINID:ZDB-GENE-080709-4 Length:759 Species:Danio rerio


Alignment Length:542 Identity:181/542 - (33%)
Similarity:279/542 - (51%) Gaps:93/542 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   128 RNTPYFLRSRENEIGSADTLEIVASKSTGSEECSTPEDNINVVVRVRPLNDKEKRDRHGSTLQFP 192
            ||:  .||.|...||         .||          :.:.||||.||||.||:          .
Zfish     4 RNS--LLRPRSMSIG---------KKS----------EAVKVVVRCRPLNKKEE----------A 37

  Fly   193 GNGQVILEGN-DVGQKRSHNRDS----VRVFTYNVVFEPGATQEDILDYSGIKRIIEMGIEGFSC 252
            .|.:.|:|.: .:||....|..|    |:.||::.|::..:.|.::.||: .|.:|:..:.||:.
Zfish    38 MNQERIVEVDVRLGQVSVRNPKSSGSLVKSFTFDAVYDVSSKQNELYDYA-CKPLIDSVLLGFNG 101

  Fly   253 TAFCYGQTGSGKTHTLTGPPDLFVGKPNPKDPR-HGLIFRSFLYLFQLIKNRKDVNYVLKASFME 316
            |.|.|||||:|||:|:.|.         |.||. .|:|..||.::|..|...::..|:::.|::|
Zfish   102 TIFAYGQTGTGKTYTMEGV---------PTDPETRGVIPNSFQHIFTQISRSQNQQYLVRVSYIE 157

  Fly   317 IYNERVIDLLNPGSARKPLAVRWSKKSGGFFVENLFTVDCEELDDLLAVLEEGMRNRAVGSHAMN 381
            ||.|.:.|||...:.:| |.::.:.:. |.:|::|..|..:.:.::..|:..|.::|:||...||
Zfish   158 IYQEEIRDLLCKDNNKK-LELKENPEL-GVYVKDLSCVVTKNIKEIEHVMNLGNQSRSVGFTKMN 220

  Fly   382 DHSSRSHTILTVHI-LSDQQTDGGVFLSKHGKINFVDLAGSELTKKTMSEGKTLEEANNINKSLM 445
            :.|||||.|..:.| .|:...||...: :.||:|.|||||||...||..:|:..:||..||.||.
Zfish   221 ERSSRSHAIFVITIECSEMGIDGEDHI-RVGKLNMVDLAGSERQSKTGVQGRRFKEAAKINLSLS 284

  Fly   446 VLGYCISSLSDSKKRTGHIPYRDSQLTKLLADSLAGNGVTLMIACVSPAHYNHAETLNTLRYASR 510
            .||..||:|.|.|  :.|:|||||:||:||.|||.||..|:|:|.|.||...:.|||.|||||:|
Zfish   285 ALGNVISALVDGK--STHVPYRDSKLTRLLQDSLGGNAKTVMVATVGPASCYYDETLTTLRYANR 347

  Fly   511 AKRIRTKPVIKMDPREALILSLKRDIHALQMENDHLKAALNLHHQAAPNGGPVENLLELQLDRVS 575
            ||.|:.||.|..||::||:...:.:|..|:.:.:..........:...|        .|::.|..
Zfish   348 AKNIKNKPKINEDPKDALLREFQEEIARLKAQLEERGMLAKERRRQKRN--------SLRMKRSM 404

  Fly   576 SGGGVPVPKVDLQRLPELDGSELAELVKLYMVENESLRQE-------------------NNHLFT 621
            |.|.|..|     |:.|:   |:.|.|:...||:...:|:                   |..:.|
Zfish   405 SSGEVETP-----RIGEV---EVVETVREESVEDYWWKQQMAKTSANYKPDISRKLGMVNEKVKT 461

  Fly   622 VRETILRDQEIVCRENERLLKK 643
            |.| :|::|:.:    |.:::|
Zfish   462 VEE-LLKEQQAM----ENMIEK 478

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Klp54DNP_001303355.1 KISc 166..520 CDD:214526 142/360 (39%)
KISc 166..512 CDD:276812 137/352 (39%)
kif3cbNP_001017849.2 KISc_KIF3 20..351 CDD:276822 139/355 (39%)
KISc 21..358 CDD:214526 142/361 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG4280
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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