DRSC/TRiP Functional Genomics Resources

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Protein Alignment Klp54D and Cenpe

DIOPT Version :9

Sequence 1:NP_001303355.1 Gene:Klp54D / 47216 FlyBaseID:FBgn0263076 Length:760 Species:Drosophila melanogaster
Sequence 2:XP_038959788.1 Gene:Cenpe / 362044 RGDID:1307115 Length:2456 Species:Rattus norvegicus


Alignment Length:633 Identity:181/633 - (28%)
Similarity:282/633 - (44%) Gaps:134/633 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   164 EDNINVVVRVRPLNDKEKRDRHGSTLQFPGNGQVILEGNDVGQKRSHNRDSVRVFTYNVVFEPGA 228
            |..:.|.|||||||.:|:.....|.:.:..:...|           :..|..:.|.::.||....
  Rat     4 EAAVAVCVRVRPLNSREEELGEASHIYWKTDKNAI-----------YQSDGGKSFQFDRVFHSNE 57

  Fly   229 TQEDILDYSGIKRIIEMGIEGFSCTAFCYGQTGSGKTHTLTGPPDLFVGKPNPKDPRHGLIFRSF 293
            |.:::.:...:. ||...|:|::.|.|.||||.||||||:.|..|..           |:|.|:.
  Rat    58 TTKNVYEEIAVP-IISSAIQGYNGTIFAYGQTASGKTHTMMGSEDCL-----------GVIPRAI 110

  Fly   294 LYLFQLIKNRKDVNYVLKASFMEIYNERVIDLLNPGSARKPLAVRWSKKSGGFFVENLFTVDCEE 358
            ..:||.||...:..::|:.|:||||||.:.|||......|||.:|..      ...|::..|..|
  Rat   111 HDIFQRIKKFPEREFLLRVSYMEIYNETITDLLCNTQKVKPLIIRED------INRNVYVADLTE 169

  Fly   359 -----LDDLLAVLEEGMRNRAVGSHAMNDHSSRSHTILTVHILSDQQT-----DGGVFLSKHGKI 413
                 .:..|..|..|.:||..|...||..|||||||..:.:.|.::.     ||.:   |...:
  Rat   170 EVVYTAEMALKWLATGEKNRHYGITKMNQRSSRSHTIFRMILESREKAESSNCDGSI---KVSHL 231

  Fly   414 NFVDLAGSELTKKTMSEGKTLEEANNINKSLMVLGYCISSLSDSKKRTGHIPYRDSQLTKLLADS 478
            |.|||||||...:|.:||..|:|...||::|::||..|..|||.:. .|.|.||||:||::|.:|
  Rat   232 NLVDLAGSERAAQTGAEGMRLKEGCYINRNLLILGQVIKKLSDGQV-GGFINYRDSKLTRILQNS 295

  Fly   479 LAGNGVTLMIACVSPAHYNHAETLNTLRYASRAKRIRTKPVI-KMDPREALILSLKRDIHALQME 542
            |.||..|.:|..::||..:  |||.||::||.||.::..|.: ::...|||:...:|:|      
  Rat   296 LGGNAKTRIICTITPASLD--ETLTTLQFASTAKYMKNTPYVNEVSNDEALLKRYRREI------ 352

  Fly   543 NDHLKAALNLHHQAAPNGGPVENLLELQLDRVSSGGGVPVPKVDLQRLPELDGSELAELVK---- 603
                                |:  |:.||:.|::          ..|..|::..:||:|:.    
  Rat   353 --------------------VD--LKKQLEEVNT----------KTRAQEIEKDQLAQLLDEKDL 385

  Fly   604 LYMVENESLRQENNHLFTVRETILRDQEIVCRENERL---LKKLEDVNKVCVRSPLIPARPAISP 665
            |..|::|.: |....:.....:|...||:..::..|:   ..|::|.|  .|:...||..  |:.
  Rat   386 LQKVQDEKI-QNLKRMLVTSSSIALQQELEIKKKRRVTWCFGKMKDSN--YVKEFKIPTN--ITT 445

  Fly   666 TTGKE--TP----------------GTEIWTNP-EPLQ----SPPGPDLPIEQRMSENANRRTDT 707
            .|.|.  ||                .:|::.|. |||.    |.....|..|...||..:..|. 
  Rat   446 RTRKTSVTPLRENSLMKLGESALSWESEVFDNTLEPLAEAEWSSATALLSEENLESELTSLNTQ- 509

  Fly   708 AQKRIDQKRIAKNILIMANAFRKPDSDITKELNLNPEEAHAKQSTEFM 755
                      ..|:::.....|:.:.|    |.|..:|.:..:..||:
  Rat   510 ----------YNNLVLDYEQLRRENED----LKLKLKEKNELEEFEFL 543

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Klp54DNP_001303355.1 KISc 166..520 CDD:214526 127/363 (35%)
KISc 166..512 CDD:276812 124/355 (35%)
CenpeXP_038959788.1 KISc_CENP_E 6..329 CDD:276825 126/357 (35%)
Smc <334..1057 CDD:224117 53/268 (20%)
Smc 787..1603 CDD:224117
Smc 1320..2167 CDD:224117
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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