DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Klp54D and Kif26a

DIOPT Version :9

Sequence 1:NP_001303355.1 Gene:Klp54D / 47216 FlyBaseID:FBgn0263076 Length:760 Species:Drosophila melanogaster
Sequence 2:XP_006240697.1 Gene:Kif26a / 314473 RGDID:1307957 Length:1881 Species:Rattus norvegicus


Alignment Length:804 Identity:156/804 - (19%)
Similarity:268/804 - (33%) Gaps:295/804 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 SSGGSSADSAGTS-----------GSRRGR---APVAGSRGRKTPSTTSTGQSQ----------R 86
            |:|||:|.||..|           .|:|.:   .|...:||..|.:|..:|..|          .
  Rat   285 SAGGSTAPSAAASFFIRAAQKLSLASKRKKHPPPPAPSARGSSTYATDFSGTLQLWPPPVPPCLL 349

  Fly    87 QSSGSSSSMPRSRSLTNGMRRLSPQKGTGSSGGTGGGGGSSRNTPYFLR--SRENEIGSADTLEI 149
            :::..:...|.:......|.|:.|.:|...|.          .:..||:  ||:.::...|    
  Rat   350 RAASKAKENPSNFGKVKVMLRIWPAQGVQRSA----------ESTSFLKVDSRKKQVTLYD---- 400

  Fly   150 VASKSTGSEECSTPEDNINVVVRVRPLNDKEKRDRHGSTLQFPGNGQVILEGNDVGQKRSHNRDS 214
               .:.|...|:..                    ||..|...|                      
  Rat   401 ---PAAGPPGCAGL--------------------RHAPTAPVP---------------------- 420

  Fly   215 VRVFTYNVVFEPGATQEDILDYSG-IKRIIEMGIEGFSCTAFCYGQTGSGKTHTLTG----PPDL 274
             ::|.::.:|...:.|.::.  || :..:::..:.|.....|.:|....||::|:.|    |..|
  Rat   421 -KMFAFDAIFPQDSEQAEVC--SGTVADVLQSVVGGADGCIFSFGHMSLGKSYTMIGKDSSPQSL 482

  Fly   275 FVGKPNPKDPRHGLIFRSFLYLFQLIKNRKD---VNYVLKASFMEI--YNERVIDLL-------- 326
                        |::..:..:||:||..||:   ..:.::.|.:|:  :::.:.|||        
  Rat   483 ------------GIVPCAISWLFRLIDERKERLGTRFSIRVSAVEVCGHDQSLRDLLAEVASGCL 535

  Fly   327 ---------------------NPGSARKPLAVRWSKKSGGFFVENLFTVDCEELDDLLAVLEEGM 370
                                 |....|.|.|     :...|:           ||..||.     
  Rat   536 QDTQSPGVYLREDPVCGTQLRNQNELRAPTA-----EKAAFY-----------LDAALAA----- 579

  Fly   371 RNRAVGSHAMNDHSSR-SHTILTVHILS---DQQTDGGVFLSKHGKINFVDLAGSELTKKTMSEG 431
              |:.......:.:.| ||.:.|:|:..   ::...||: .....:::.:||...|.......|.
  Rat   580 --RSTSRAGCGEDARRTSHMLFTLHVYQYRVEKCGQGGM-SGGRSRLHLIDLGSCEAAPSRGGEA 641

  Fly   432 KTLEEANNINKSLMVLGYCISSLSDSKKRTGHIPYRDSQLTKLLADSLAGNG-VTLMIACVSPAH 495
                ....:..||..||..|.:|.:..|   |:||||..||.||.:|||... .|.|||.:|.:.
  Rat   642 ----SGGPLCLSLSALGSVILALVNGAK---HVPYRDHTLTMLLRESLATTSCCTTMIAHISDSP 699

  Fly   496 YNHAETLNTLRYASRAKRIRTK-----------------------PVIKMDPREALILSLKRDIH 537
            .:|||||:|::.|:|..|:|.|                       |.::......::|...|...
  Rat   700 THHAETLSTVQLAARIHRLRRKKGKHASSSSGGESSCEEGRARRPPHLRPFHPRTVVLDPDRSAP 764

  Fly   538 ALQMENDHLKAALNLHHQAAPN------GGPVENLLELQLDRVSSGGGVPVPKVDLQRLPELDGS 596
            ||..:.|:..::    .|:...      ||...:..|| .|.......||:.....:|.|. :|.
  Rat   765 ALSGDPDYSSSS----EQSCDTVIYVGPGGTALSDREL-TDNEGPPDFVPIIPALSRRRPS-EGP 823

  Fly   597 ELAELVKLYMVENESLRQENNHLFTVRETILRDQEIVCRENERLLKKLEDVNKVCV--------- 652
            ..|:..:                              |.....|.::||     |:         
  Rat   824 RDADHFR------------------------------CSTFAELQERLE-----CIDGSEGFPGP 853

  Fly   653 ---------------RSPLIP----ARPAISP---------TTGKETPGTEIWTNPEPLQSPP-- 687
                           |.|.:|    .|.|::|         ::|:|||.    :..||.::.|  
  Rat   854 QGGSDGAQASPSRGSRKPSLPESTCLRKAVAPSVVTGCPRSSSGQETPR----STSEPSKTGPQG 914

  Fly   688 -------GPDLPIEQRMSENANRR 704
                   .|:.|...:::....||
  Rat   915 DQRVDGTRPEPPAPDKITGGGGRR 938

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Klp54DNP_001303355.1 KISc 166..520 CDD:214526 87/420 (21%)
KISc 166..512 CDD:276812 83/389 (21%)
Kif26aXP_006240697.1 KISc 364..716 CDD:276812 95/456 (21%)
KISc 365..725 CDD:214526 98/464 (21%)
PRK07764 <837..1309 CDD:236090 21/111 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG4280
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.