DRSC/TRiP Functional Genomics Resources

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Protein Alignment Klp54D and Kif13b

DIOPT Version :10

Sequence 1:NP_001303355.1 Gene:Klp54D / 47216 FlyBaseID:FBgn0263076 Length:760 Species:Drosophila melanogaster
Sequence 2:NP_001398965.1 Gene:Kif13b / 305967 RGDID:1303307 Length:1843 Species:Rattus norvegicus


Alignment Length:681 Identity:192/681 - (28%)
Similarity:295/681 - (43%) Gaps:189/681 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   164 EDNINVVVRVRPLNDKEKRDRHGSTLQFPGNGQVILEGNDVGQKRSHNRDSVRVFTYNVVF---- 224
            :..:.|.|||||:|.:| .|.|...:......:|||...:....:...|...::|.|:..|    
  Rat     3 DSKVKVAVRVRPMNRRE-IDLHTKCVVDVEANKVILNPINTNLSKGDARGQPKIFAYDHCFWSMD 66

  Fly   225 ----EPGATQEDILDYSGIKRIIEMGIEGFSCTAFCYGQTGSGKTHTLTGPPDLFVGKPNPKDPR 285
                |..|.|:|:....| :.|::...:|::...|.||||||||::|:.|..|           :
  Rat    67 ESVREKYAGQDDVFKCLG-ENILQNAFDGYNACIFAYGQTGSGKSYTMMGTAD-----------Q 119

  Fly   286 HGLIFRSFLYLFQLIKNRKDVN----YVLKASFMEIYNERVIDLLNPGSARKPLAVRWSKKSGGF 346
            .|||.|....||:  :.:|:.|    :.::.|:||||||:|.|||:|..:|:.|.||.....|. 
  Rat   120 PGLIPRLCSGLFE--RTQKEENEEQSFKVEVSYMEIYNEKVRDLLDPKGSRQTLKVREHSVLGP- 181

  Fly   347 FVENLFTVDCEELDDLLAVLEEGMRNRAVGSHAMNDHSSRSHTILTV---HILSDQQTDGGVFLS 408
            :|:.|..:......|:.:::.||.::|.|.:..||:.|||||.:..:   |.|.|.::  |....
  Rat   182 YVDGLSKLAVTSYKDIESLMSEGNKSRTVAATNMNEESSRSHAVFKITLTHTLYDVKS--GTSGE 244

  Fly   409 KHGKINFVDLAGSELTKKTMSEGKTLEEANNINKSLMVLGYCISSLSD---SKKRTGHIPYRDSQ 470
            |.||::.|||||||...||.:.|..|:|.:||||||..||..||:|:|   .|.:...:|||||.
  Rat   245 KVGKLSLVDLAGSERATKTGAAGDRLKEGSNINKSLTTLGLVISALADQGAGKNKNKFVPYRDSV 309

  Fly   471 LTKLLADSLAGNGVTLMIACVSPAHYNHAETLNTLRYASRAKRIRTKPVIKMDPREALILSLKRD 535
            ||.||.|||.||..|.|:|.||||..|:.|||:|||||.|||.|....|:..||...:|..|:.:
  Rat   310 LTWLLKDSLGGNSKTAMVATVSPAADNYDETLSTLRYADRAKHIINHAVVNEDPNARIIRDLREE 374

  Fly   536 IHALQMENDHLKAALNLHHQAAPNGGPVENLLELQLDRVSSGGGVPVPKVDLQRLPELDGSELAE 600
            :..|:.:                                       :.|.:..:.|||       
  Rat   375 VEKLREQ---------------------------------------LTKAEAMKSPEL------- 393

  Fly   601 LVKLYMVENESLRQENNHLFTVR-ETILRDQEIVCRENERLLKKL------------ED----VN 648
              |..:.|:|.|.||    .||. |..||..|.:.:|.::.|:.|            :|    ||
  Rat   394 --KDRLEESEKLIQE----MTVTWEEKLRKTEEIAQERQKQLESLGISLQTSGIKVGDDKCFLVN 452

  Fly   649 KVCVRSPLIPARPAIS-----------------------------PTTG--KETPGTEIWTNPE- 681
                    :.|.||::                             |..|  ...|..::...|: 
  Rat   453 --------LNADPALNELLVYYLKEHTLIGSANSQDIQLCGMGILPEHGIIDIMPEGQVMLTPQK 509

  Fly   682 -------------PLQSPPGP------------DLPIEQRMSE------NANRRTDTAQKRIDQK 715
                         |:|...|.            :||.:::.:|      .|:.:.|::.:::|  
  Rat   510 NTRTFVNGSSVSSPIQLHHGDRILWGNNHFFRLNLPKKKKKAEREDEEREASLKNDSSSEQLD-- 572

  Fly   716 RIAKNILIMANAFRKPDSDITKELNLNPEEA 746
                       |.....|:::.|:|.|.|.|
  Rat   573 -----------ADGDSSSEVSSEINFNFEYA 592

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Klp54DNP_001303355.1 KISc 166..520 CDD:214526 141/371 (38%)
Kif13bNP_001398965.1 KISc_KIF1A_KIF1B 4..360 CDD:276816 142/373 (38%)
Kinesin_assoc 357..469 CDD:465047 31/171 (18%)
FHA_KIF13B 447..545 CDD:438782 12/105 (11%)
COG4913 <614..>760 CDD:443941
KIF1B 756..802 CDD:463574
C2-C2_1 <888..>952 CDD:463310
bMERB_dom <1073..1143 CDD:463467
DUF3694 <1214..1277 CDD:463599
PHA03247 <1377..1715 CDD:223021
CAP_GLY 1720..1783 CDD:460154
Blue background indicates that the domain is not in the aligned region.

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