DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ATM and tefu

DIOPT Version :10

Sequence 1:NP_000042.3 Gene:ATM / 472 HGNCID:795 Length:3056 Species:Homo sapiens
Sequence 2:NP_001036712.1 Gene:tefu / 41839 FlyBaseID:FBgn0045035 Length:2767 Species:Drosophila melanogaster


Alignment Length:3324 Identity:745/3324 - (22%)
Similarity:1334/3324 - (40%) Gaps:833/3324 - (25%)


- Green bases have known domain annotations that are detailed below.


Human     1 MSLVLNDLLICCRQLEHDRATERKKEV----EKFKRLIRDPETIKHLDRHSDSKQGKYLNWDAVF 61
            ||.:||::......|:..:|..|.|.:    ||......|.:.: .|.:.||      ::|..:|
  Fly     1 MSALLNEIQRILGDLQSGKAASRNKGIQQLDEKLSSCREDLDKL-FLSKTSD------ISWTTIF 58

Human    62 RFLQKYIQKETECL-----------------------RIAKPNVSASTQASRQKKMQEISSLVKY 103
            ...::.:.|:...|                       :|.:.|:.|.:|.|........:|:...
  Fly    59 EASKEALFKQAGNLEDVNEKVFKTLAGKNYLYDNVLEKITQFNLEAGSQTSGNGHFLAKTSIFSA 123

Human   104 FIKCANRRAPRLKCQELLNYIMDTVKDSSNGAIYGADCSNILLKDILSVRKYWCEISQQQWLELF 168
            |       ...:|.:.::.|..|.:             .::|.|.|.|...|..::...::..:.
  Fly   124 F-------EDGIKMRVVVKYFGDRI-------------LSLLEKGIYSSVSYVRDLKINEYSRIL 168

Human   169 SVYFRLYLKPSQDVHRVLVARIIHAVTKGCCSQTD--GLNSKFLDFFSKAIQCARQEKSSSGLN- 230
            |..|.|    :.|:..||..||:..:|:......|  .|:...:::.        .|.||..|: 
  Fly   169 SYLFEL----NVDMDEVLRTRILKCITRTVSLAKDRVQLHVDLVEYL--------PELSSFALSA 221

Human   231 ------HILAALTIFLKTLAVNFRIRVCELGDEILPTLLYIWTQHRLNDSLKEVIIELFQLQIYI 289
                  .|:....||...||||:..::.....||||.|.....:....|..:.:..:.....::.
  Fly   222 FGARKTEIVRVYLIFASELAVNYNHQLNVHMQEILPKLCEYHDEDAFRDDTRNLFFQCVSKSLHS 286

Human   290 HHPK---------GAKTQEKGAYESTKWRSILYNLYDLLVNEI---------SHIGSRGKYSSGF 336
            .:.|         |....|       ||...|..|..::..||         :.:.|..|:|..|
  Fly   287 MYLKMDMCDFNTLGVPVHE-------KWPQTLLRLKTIVNVEIRKNSWARCKNALLSNNKFSDPF 344

Human   337 RNIAVKENLIELMADICHQVFNEDTRSLEISQSYTTTQRESSDYSVPCKRKKIELGWEVIKDHLQ 401
                :|.:.:.:...:.|         ||     |....|:.:...|.|..|.....|.|...:.
  Fly   345 ----IKMSALAMYIVLWH---------LE-----TKKADENGEGDAPKKIPKPADKMETIFSLID 391

Human   402 KSQNDFDLVPWLQIATQLISKYPASLPNCELSPLLMILSQLLPQQRHGERTPYVLRCLTEVALCQ 466
            |.:|.|:.| ||.|.|:::......|........|..:::::....:.:....:..||..:...:
  Fly   392 KKENTFNDV-WLAIFTEILQLSSVILNVANYQMALTTVAEIMQMYGNAKNLRNLRLCLAHLLTKE 455

Human   467 DKRSNLESSQKSDLLKLWNKI--WCITFRGISSEQIQAENFGL--------LGAIIQGSLVE--V 519
            .:..:.:|.::..|.:||:::  ..|:....:||:|:.:...|        |...:..:|:.  :
  Fly   456 QELLHSKSIREDFLGELWSQMANQLISETTTNSEEIKEKQLVLQMLIRHNKLNQKLSSTLLNNII 520

Human   520 DREFWKLFTGSACRPSCPAVCCLTLALTTSIVPGTVK-MGIEQNMCEVNRSFSLKESIMKWL--- 580
            ..|..|       |..|.|               |:: :.|..:.|..:::.:..|.|:.|.   
  Fly   521 SNEMLK-------RNECLA---------------TIREIFIHADKCGQDKASADLEPIIAWAYGS 563

Human   581 ---------------LFYQLEGD-----LENSTEVPPILH-SNFPHLV--LEKILVSLTMKN--- 619
                           :..||:.|     :.|..:|..:.. |...|:|  .|:.|::.....   
  Fly   564 ADRFIAAQMIHNIDSIDAQLQADTFAISIINFLDVQQLRQISQSEHIVPSTERNLLAYKYNEQLI 628

Human   620 C--KAAMNFFQSVPECEHHQKDKEELSFSEVEELFLQTTFDKMDFLTIVRECGIEKHQSSIGFSV 682
            |  |.....|:|:...:           ||.:...:|:.:|     .::|....|..:.:...::
  Fly   629 CFDKDYATPFESITHIQ-----------SETKNCLIQSNYD-----CLMRGLNFEIAKENKPAAI 677

Human   683 HQNLKESLDRCLLGLSEQLLNNYSSEITNSETLVRCSRLLVGVLGCYCY---------------- 731
            .:||...|.  |:...|:||:   .::.:::|...|.  |:..:|.|..                
  Fly   678 IKNLNSLLK--LICTMERLLH---YKVFDADTYTGCP--LIKRIGLYLSHIEFQLKANGAEILDK 735

Human   732 --MGVIAEEEAYKSELF------------QKAKSLMQCAGESITL--FKNKTNEEFRIGSLRNMM 780
              :..|...|.|..::|            |..:.|::..|.::.|  .:.:.:.:...|::   .
  Fly   736 SDLPEILRLEIYVLDVFRTNLVLLDYLERQPIEMLVEFVGAALKLHSMQRERSVDADHGTI---T 797

Human   781 QLCTRCLSNCTKKSPNKIASGFFLRLLTSKLMNDIADICKSLASFIKKPFDRGEVESMEDDTNGN 845
            :||                            :|.:|.:|                          
  Fly   798 RLC----------------------------LNILAGLC-------------------------- 808

Human   846 LMEVEDQSSMNLFNDYPDSSVSDANEPGESQSTIGAINPLAEEYLSK-------QDLLFLDMLKF 903
                       .:|.:.|.                     |.|::.|       ||:|.  :.|.
  Fly   809 -----------AYNSHRDE---------------------AFEHIVKVTMRWHPQDVLI--VTKM 839

Human   904 LCLCVTTAQTNTVSFRAADIRRKLLMLIDSSTLEPTKSLHLHMYLMLLKELPGEEYPLPMEDVLE 968
            ||.|.|.::.                   ||:.                                
  Fly   840 LCSCQTISEA-------------------SSSW-------------------------------- 853

Human   969 LLKPLSNVCSLYRRDQDVCKTILNH---VLHVVKNLGQSNMDSENTRDAQGQFLTVIGAFWHLTK 1030
            |:..|..:...:.:|.::...::.|   :.:.|::       .||..|   ..|..:.:...:..
  Fly   854 LVSKLKTLFQQHHQDAELMDKVVQHMPTIFYFVRH-------KENHLD---DMLMALNSLLRIAI 908

Human  1031 ERKYIFSVRMALVNCLKTLLEADP----YSKWAILNVMGKDF---PVNEV-------FTQFLADN 1081
            ::.|..::...:|.|:..:.:..|    ...:|::......|   |..||       ||..|..|
  Fly   909 KKSYTSNLTAKIVRCVGLIAQRCPDIYLLENFAVICKSTAKFITMPTLEVRFATLFTFTILLESN 973

Human  1082 HHQVRMLAAESINRLFQDTKGDSSRLLKALPLKLQQTAFENAYLKAQEGMREMSHSAENPETLDE 1146
                 .:.:::|..  ..|..|           ..|..:|:...|      :::::.|     |.
  Fly   974 -----CVTSDAIGH--SRTHWD-----------FCQELYESIEFK------KLTYNNE-----DA 1009

Human  1147 IYNRKSVLLTLIAVVLSCSPICEKQALFALCKSVKENGLEPHLVKKVLEK-----VSETFGYRR- 1205
            |.|..::::.::..:...|...::.||..|        |....::::.|:     .|.:..:|: 
  Fly  1010 IQNSNALIVQMLIAIFLRSSFHQEIALKEL--------LHHCALRRLTEREFISLQSMSSCHRQT 1066

Human  1206 LEDFMASHLDYLVLEWLNLQDTEYNLSSFPFILLNYTNIEDFYRSCYKVLIPHLVIRSHFDEVKS 1270
            :.|.:......|:..|   ....:.:|.||:.|. |:...:|.::....::.:..:....::::.
  Fly  1067 VRDLIRPFAAILLHHW---SSKRWPISKFPYFLC-YSTKSEFRKTHASEIMAYTFLYGKTEDIER 1127

Human  1271 IANQIQEDWKSLLTDCFPKILVNILPYFAYEGTRDSGMAQQRETATKVYDMLKSENLLGKQIDHL 1335
            .:..|.|:           :.:.||..|..  .::|..::......|.:..|.||||...|::..
  Fly  1128 CSKSISEE-----------LALPILASFLL--IKNSSCSESEGQNFKEHLQLLSENLSYSQLNAT 1179

Human  1336 FISNLPEIVVELLMTLHEP------------ANSSAS------QSTDLCDFSGDLDPAPNP---- 1378
            .:....:|:..::..||:|            .|.:||      :|...| .:..:||...|    
  Fly  1180 DVDLDLDILCYVISMLHDPQEMMRLFGSLAICNRTASWYSLSGESLFKC-LNFHIDPEMRPSMDS 1243

Human  1379 ----------PHFPSHVIKATFAYI-SNCHKTKLKSILEILSKSPDSYQKI--LLAICEQAAETN 1430
                      .|  |.|:...|..: :||:.....|            |.:  ....||.|....
  Fly  1244 RIQSMTTLQTKH--SRVLVDIFGRLKTNCYSASFSS------------QALHDFFLYCEVADAVY 1294

Human  1431 NVYKKHRILKIYHLFVSLLLKDIKSGLGGAWAFVLRDVIYTLIHYINQRPSCIMDVSL--RSFSL 1493
            :..:|:..:...   .|..::||       |.||:|.:|:|....:.......:::.|  .:|.|
  Fly  1295 DAARKNETIVTQ---CSFFVRDI-------WFFVVRLLIHTKFIRVQMAALTFLELLLNKHNFRL 1349

Human  1494 CCDLLSQVCQTAVTYCKDALENHLHVIVGTL--IPLVYEQVEVQKQVLDLLKYLVIDNKDNENLY 1556
                             |..:||...|...|  ..|..|..||:::.:.::.|::...|.:.||.
  Fly  1350 -----------------DDYQNHFGDIAKLLSNFQLCCEAKEVREKTMSIVMYILESKKGHINLN 1397

Human  1557 ITIKLLDPFPDHVVFKDLRITQQKIKYSRGPFSLLEEINHFLSVSVYDALPLTRLEGLKDLRRQL 1621
               ..|:...|....|.||   :..|.|: |.....::.::|...:....|    |.|:|||..:
  Fly  1398 ---SFLEETTDCEFLKPLR---EDCKSSQ-PNIDRADVANYLRSFLLSPTP----ERLRDLRTYI 1451

Human  1622 ELHKDQMVDIMRASQDNPQDGIMVKLVVNLLQLSKMAINHTGEKEVLEAVGSCLGEVGPIDFSTI 1686
            ..|||::.:         .:.::..::..|:|:::.|.|.|...:.|:    ||.::||:..||:
  Fly  1452 AEHKDKVQE---------HEKLLFGVINKLIQMTRDAHNKTTSIDSLK----CLAQIGPLKISTV 1503

Human  1687 AIQHSKDASYTKALKLFE--DKELQWTF--IMLTYLNNTLVEDCVKVRSAAVTCLKNILATKTGH 1747
            :.....|      .:.||  :.|....|  ::...|:.:|.:...|.....|:....::.:|.|.
  Fly  1504 SYYFQTD------FEAFEKSNGEPMEAFLGVVCHSLDTSLFQFDPKTHEGLVSVAIQVVNSKPGS 1562

Human  1748 SFWEIYK---MTTDPMLAYLQPFRTSRKKFLEVPRFDKENPFEGLDDINLWIPL-----SENHDI 1804
            :..|.||   :..|...|  ..|..|.|   ::.|.|             |:.:     |.:::.
  Fly  1563 NIMERYKNLRIFADKSTA--STFLHSNK---QIRRID-------------WLSILKATKSLSYEP 1609

Human  1805 WIKTLTCAFLDSGGTKCEILQLLKPMCEVKTDFCQT-VLPYLIHDILLQDTNESWRNLLSTHVQG 1868
            |:    |||:......|..|...| :......|.:| :||::  .:||:::.|        ||:.
  Fly  1610 WM----CAFVSKVFQMCGWLGFDK-LAATSFAFAKTCLLPFI--KLLLENSLE--------HVES 1659

Human  1869 FFTSCLRHFSQTSRSTTPANLDSESEHFFRCCLDKKSQRTMLAVVDYMRRQKRPSSGTIFNDAFW 1933
             .:..|.:|.:...|:|..|    |:..||   :|::.:..|.:.:|:|         |||:  |
  Fly  1660 -LSQMLDYFFEGFTSSTAPN----SQEIFR---NKRAIKKFLHICEYIR---------IFNN--W 1705

Human  1934 -LDLNYLEVAKVAQSCAAHFTALLYAEIYADKKSMDDQEKRSLAFEEGSQSTTISSLSEKSKEE- 1996
             :.:|...|...:..|.|:|.:::|.|::|                        .|.|.|||.: 
  Fly  1706 TIPINLSNVVMASNHCQAYFLSIMYLELWA------------------------CSESPKSKADF 1746

Human  1997 -TGISLQDLLLEIYRSIGEPDSLYGCGGGKMLQPI-TRLRTYEHEAMWGKALVTYDLETAIPSST 2059
             .....||...:.|.|||..|::.|     .:.|: :||....|    |..|.|..||:  ....
  Fly  1747 LDNECFQDGAKKAYESIGCLDAIPG-----FVNPMRSRLDFLGH----GSNLSTILLES--DHLD 1800

Human  2060 RQAG--IIQALQNLGLCHILSVYLKGLDYENKDWCPELEELHYQAAWRNMQWDHCTSVSKEVEGT 2122
            |.:|  .|..::..||..    :.|...::|.:  |:     |:..||..|||..|....:...|
  Fly  1801 RASGQLCIDIMKGNGLWS----FAKLQQHQNIE--PD-----YEIFWRLGQWDSLTDPKHQQNQT 1854

Human  2123 SYHESL----------YNALQSLRDREFSTFYESLK--YARVKEVEEMCKRSLESVYSLYPTLSR 2175
            ....||          :.||:|:..||......:::  |:.|:::  :.:.|:|.:.|:|..|:.
  Fly  1855 VVRTSLDLEQEFKRHHFVALRSIGQREEENSLSAIEQAYSCVRDI--LMEISVECLQSVYKYLTW 1917

Human  2176 LQAIGELESIGEL-FSRSVTHRQLSEVYIKWQKHSQLLKDSDFSFQEPIMALRTVILEI----LM 2235
            |.::.:.|...:: |...:.....::::.|||...: ||..:||.:|.::|.:..:|::    ..
  Fly  1918 LCSLQQAEDFCQIQFGTQLDPASTTKIFRKWQTELE-LKYGNFSCKEYVIAHQIALLKLAGTRAS 1981

Human  2236 EKEMDNSQRECIKDILTKHLVE------LSILAR-TFKNTQLPERAIFQIKQYNSVSCGVSEWQL 2293
            .:..:..|::.|...|.|.:.|      |::.|: |....:||     .|::...:|.     .|
  Fly  1982 RRMSEFYQKDPISTYLMKGIEECKSAGKLNLAAKYTATLRELP-----NIRESIKISV-----LL 2036

Human  2294 EEAQVFWAKKEQSLALSILKQMIKKLD-ASCAANNPSLKLTYTECLRVCG----NWLAETCLENP 2353
            |:|::......|.:|.:||..:....: ..|....|:|:: ..|.|..|.    :|:......|.
  Fly  2037 EDAEINLKMGNQQIAKAILDYVTNNNEFVYCVQRVPALRM-QGEFLLDCNAETLSWVQSHKFNNS 2100

Human  2354 AVIMQTYLEKAVEVAGNY---------DGESSDELRNGKMKAFLSLARFSDTQYQRIENYMKSSE 2409
            ..::..:::....::..|         |..:|.:    :..|:.::|:::|.:||::.:|..|.|
  Fly  2101 LKLIDDFVQHRQTLSEKYRDIFDWHQLDAYASKQ----RTAAYATIAKYADREYQQLHDYRHSQE 2161

Human  2410 FENKQALLKRAKEEVGLLREHKIQTNR-YTVKVQRELELDELALRALKEDRKRFLCKAVENYI-N 2472
            ::..:.::::.::....:.:.:.|..| .:|:::|...|||..|..::|....:|..|:.||: .
  Fly  2162 YQTLKDIIEQNRQTAEKVTQRENQDRRVISVQMKRYASLDEQQLNQIEEKLTEYLRLALTNYMAY 2226

Human  2473 CLLSGEEHDMWVFRLCSLWLENSGVSEVNGMMKRDGMKIPTYKFLPLMYQLAARMGTK---MMGG 2534
            |.|........::|:.|||..|:...:....:|.:.:.:|:|||:....||.||:.:|   ::.|
  Fly  2227 CRLDSGFSSAAIYRIISLWFTNATSKQCQECIKDEILTVPSYKFICAANQLTARLNSKNTSLLKG 2291

Human  2535 LGFHEVLNNLISRISMDHPHHTLFIILALANANRDEFLTKPEVARRSRITKNVPKQSSQLDEDRT 2599
                  |.:|:.:...|||:||.:.:..|..|:.|...:..|   ||.|.:.:            
  Fly  2292 ------LTDLLVQCGKDHPYHTFYQLYPLVFAHLDGENSNTE---RSGIARKI------------ 2335

Human  2600 EAANRIICTIRSRRPQMVRSVEALCDAYIILANLDATQWKTQRKGINIPAD--------QPITKL 2656
               ..:||.......:..:.:|:|..|.|..||    :.||..   |.|..        ..:.:.
  Fly  2336 ---IAMICEKNGTAGECSKQLESLLPALITFAN----EGKTND---NRPVSDSVRNKQFDKVRRW 2390

Human  2657 KNLEDVVVPTMEIKVDHTGEYGNLVTIQSFKAEFRLAGGVNLPKIIDCVGSDGKERRQLVKGRDD 2721
            :||..|..||:|:.|..:.|| :::::..:..|....||:|.|..|.||.||||.|.|||||:||
  Fly  2391 RNLNAVHCPTLELPVMPSKEY-SIISVVKWTNETTQCGGLNAPVKIMCVCSDGKIRAQLVKGKDD 2454

Human  2722 LRQDAVMQQVFQMCNTLLQRNTETRKRKLTICTYKVVPLSQRSGVLEWCTGTVPIGEFL-VNNED 2785
            |||||||||||.:.|.||.:::|..:|||.:.||||.|||.|||:|||||.:||:|.:| |..:.
  Fly  2455 LRQDAVMQQVFGIVNELLNQDSEFIERKLKLRTYKVTPLSMRSGILEWCTNSVPVGHYLVVEGKG 2519

Human  2786 GAHKRYRPNDFSAFQCQKKMMEVQKKSFEEKYEVFMDVCQNFQPVFRYFCMEKFLDPAIWFEKRL 2850
            |||.||||||::..:|:|...:..|...|.:|.::..:|:|.:|||.||.:|||..|.:|||:||
  Fly  2520 GAHARYRPNDWNNNKCRKLSSDHLKSPKETRYAIYKKICENIKPVFHYFLLEKFPIPGVWFERRL 2584

Human  2851 AYTRSVATSSIVGYILGLGDRHVQNILINEQSAELVHIDLGVAFEQGKILPTPETVPFRLTRDIV 2915
            |||.||||:|:|||:|||||||.||||:::|:||::|||.|:|||||||..||||||||||||.|
  Fly  2585 AYTNSVATTSMVGYVLGLGDRHTQNILVDQQTAEVIHIDFGIAFEQGKIQTTPETVPFRLTRDFV 2649

Human  2916 DGMGITGVEGVFRRCCEKTMEVMRNSQETLLTIVEVLLYDPLFDWTMNPLKALYLQQRPEDETEL 2980
            ..|||.|.:|||.:.||.||.::|..:....||:|||||||||.|.:     |..:|.|:...| 
  Fly  2650 APMGICGTKGVFAKSCEATMHILRRYKSVFTTILEVLLYDPLFIWGV-----LKKKQSPQQSGE- 2708

Human  2981 HPTLNADDQECKRNLSDIDQSFNKVAERVLMRLQEKLKGVEEGTV--LSVGGQVNLLIQQAIDPK 3043
                               :|.|.||:|.|:.:|.||.|.|.||:  .:|..||..||.:|..|.
  Fly  2709 -------------------ESVNLVAQRALLLVQNKLDGREAGTMGDSNVEAQVERLINEATLPS 2754

Human  3044 NLSRLFPGW 3052
            ||..|||||
  Fly  2755 NLCMLFPGW 2763

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ATMNP_000042.3 TAN 8..165 CDD:463317 29/183 (16%)
Interaction with ABL1. /evidence=ECO:0000269|PubMed:9168117 1373..1382 4/22 (18%)
FAT 2097..2489 CDD:396714 89/431 (21%)
PIKKc_ATM 2683..2962 CDD:270715 161/279 (58%)
G-loop. /evidence=ECO:0000255|PROSITE-ProRule:PRU00269 2692..2698 2/5 (40%)
Catalytic loop. /evidence=ECO:0000255|PROSITE-ProRule:PRU00269 2867..2875 6/7 (86%)
Activation loop. /evidence=ECO:0000255|PROSITE-ProRule:PRU00269 2887..2911 19/23 (83%)
FATC 3026..3055 CDD:460514 14/27 (52%)
Microbody targeting signal, atypical. /evidence=ECO:0000269|PubMed:26344566 3046..3048 0/1 (0%)
tefuNP_001036712.1 FAT 1829..>2064 CDD:396714 55/254 (22%)
PIKKc_ATM 2416..2696 CDD:270715 161/279 (58%)
FATC 2739..2767 CDD:460514 14/25 (56%)

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