DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment NDUFS1 and Ndufs1

DIOPT Version :10

Sequence 1:NP_001186913.1 Gene:NDUFS1 / 4719 HGNCID:7707 Length:741 Species:Homo sapiens
Sequence 2:NP_001005550.1 Gene:Ndufs1 / 301458 RGDID:1359670 Length:727 Species:Rattus norvegicus


Alignment Length:727 Identity:690/727 - (94%)
Similarity:711/727 - (97%) Gaps:0/727 - (0%)


- Green bases have known domain annotations that are detailed below.


Human    15 MLRIPVRKALVGLSKSPKGCVRTTATAASNLIEVFVDGQSVMVEPGTTVLQACEKVGMQIPRFCY 79
            ||||||::||:||||||||.||:|.||||||||||||||||||||||||||||||||||||||||
  Rat     1 MLRIPVKRALIGLSKSPKGYVRSTGTAASNLIEVFVDGQSVMVEPGTTVLQACEKVGMQIPRFCY 65

Human    80 HERLSVAGNCRMCLVEIEKAPKVVAACAMPVMKGWNILTNSEKSKKAREGVMEFLLANHPLDCPI 144
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Rat    66 HERLSVAGNCRMCLVEIEKAPKVVAACAMPVMKGWNILTNSEKSKKAREGVMEFLLANHPLDCPI 130

Human   145 CDQGGECDLQDQSMMFGNDRSRFLEGKRAVEDKNIGPLVKTIMTRCIQCTRCIRFASEIAGVDDL 209
            |||||||||||||||||:|||||||||||||||||||||||||||||||||||||||||||||||
  Rat   131 CDQGGECDLQDQSMMFGSDRSRFLEGKRAVEDKNIGPLVKTIMTRCIQCTRCIRFASEIAGVDDL 195

Human   210 GTTGRGNDMQVGTYIEKMFMSELSGNIIDICPVGALTSKPYAFTARPWETRKTESIDVMDAVGSN 274
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Rat   196 GTTGRGNDMQVGTYIEKMFMSELSGNIIDICPVGALTSKPYAFTARPWETRKTESIDVMDAVGSN 260

Human   275 IVVSTRTGEVMRILPRMHEDINEEWISDKTRFAYDGLKRQRLTEPMVRNEKGLLTYTSWEDALSR 339
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Rat   261 IVVSTRTGEVMRILPRMHEDINEEWISDKTRFAYDGLKRQRLTEPMVRNEKGLLTYTSWEDALSR 325

Human   340 VAGMLQSFQGKDVAAIAGGLVDAEALVALKDLLNRVDSDTLCTEEVFPTAGAGTDLRSNYLLNTT 404
            ||||||||:||.||||||||||||||||||||||:||||||||||:||..|||||||||||||||
  Rat   326 VAGMLQSFEGKAVAAIAGGLVDAEALVALKDLLNKVDSDTLCTEEIFPNEGAGTDLRSNYLLNTT 390

Human   405 IAGVEEADVVLLVGTNPRFEAPLFNARIRKSWLHNDLKVALIGSPVDLTYTYDHLGDSPKILQDI 469
            ||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||
  Rat   391 IAGVEEADVVLLVGTNPRFEAPLFNARIRKSWLHNDLKVALIGSPVDLTYRYDHLGDSPKILQDI 455

Human   470 ASGSHPFSQVLKEAKKPMVVLGSSALQRNDGAAILAAVSSIAQKIRMTSGVTGDWKVMNILHRIA 534
            |||:|.||:||..|||||||||||||||:|||||||||||||||||:.||...:|||||||||||
  Rat   456 ASGNHEFSKVLNAAKKPMVVLGSSALQRDDGAAILAAVSSIAQKIRVASGAAAEWKVMNILHRIA 520

Human   535 SQVAALDLGYKPGVEAIRKNPPKVLFLLGADGGCITRQDLPKDCFIIYQGHHGDVGAPIADVILP 599
            |||||||||||||||||||||||:||||||||||||||||||||||:||||||||||||||||||
  Rat   521 SQVAALDLGYKPGVEAIRKNPPKLLFLLGADGGCITRQDLPKDCFIVYQGHHGDVGAPIADVILP 585

Human   600 GAAYTEKSATYVNTEGRAQQTKVAVTPPGLAREDWKIIRALSEIAGMTLPYDTLDQVRNRLEEVS 664
            ||||||||||||||||||||||||||||||||||||||||||||||:||||||||||||||.|||
  Rat   586 GAAYTEKSATYVNTEGRAQQTKVAVTPPGLAREDWKIIRALSEIAGITLPYDTLDQVRNRLGEVS 650

Human   665 PNLVRYDDIEGANYFQQANELSKLVNQQLLADPLVPPQLTIKDFYMTDSISRASQTMAKCVKAVT 729
            ||||||||:|.|||||||:||:|||:|:.||||||||||||||||||||||||||||||||||||
  Rat   651 PNLVRYDDVEEANYFQQASELAKLVDQEFLADPLVPPQLTIKDFYMTDSISRASQTMAKCVKAVT 715

Human   730 EGAQAVEEPSIC 741
            ||||||||||||
  Rat   716 EGAQAVEEPSIC 727

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NDUFS1NP_001186913.1 NuoG 48..640 CDD:273904 569/591 (96%)
NADH_dhqG_C 682..724 CDD:462757 36/41 (88%)
Ndufs1NP_001005550.1 NuoG 34..626 CDD:273904 569/591 (96%)
NADH_dhqG_C 668..710 CDD:462757 36/41 (88%)

Return to query results.
Submit another query.