DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Men and NADP-ME1

DIOPT Version :9

Sequence 1:NP_524880.2 Gene:Men / 47173 FlyBaseID:FBgn0002719 Length:763 Species:Drosophila melanogaster
Sequence 2:NP_179580.1 Gene:NADP-ME1 / 816509 AraportID:AT2G19900 Length:581 Species:Arabidopsis thaliana


Alignment Length:580 Identity:284/580 - (48%)
Similarity:383/580 - (66%) Gaps:13/580 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly   180 TNLEDKMSKPDSKLDKYAQ-----RDRLGLWGTGDNEVVGSLSGFTRLLDKRYSKGLAFTHEERQ 239
            ||.:.|.|.....:|.|.:     ...:..|.      :...||::.|.|.||:||||||.:||.
plant     5 TNSDLKSSVDGGVVDVYGEDSATIEHNITPWS------LSVSSGYSLLRDPRYNKGLAFTEKERD 63

  Fly   240 QLGIHGMLPYVVREPSEQVEHCRALLARLDQDLDKYMYLISLSERNERLFYNVLSSDIAYMMPLV 304
            ...:.|:||.||.:...|.:.....:.:....|.|||.|..|.||||||||.:|..::..::|:|
plant    64 THYLRGLLPPVVLDQKLQEKRLLNNIRQYQFPLQKYMALTELQERNERLFYKLLIDNVEELLPIV 128

  Fly   305 YTPTVGLACQRYSLIHQNAKGMFISIKDKGHIYDVLKNWPETDVRAIVVTDGERILGLGDLGANG 369
            ||||||.|||::..|.:..:|:|||:||||.|.||||||||.:::.||||||||||||||||..|
plant   129 YTPTVGEACQKFGSIFRRPQGLFISLKDKGKILDVLKNWPERNIQVIVVTDGERILGLGDLGCQG 193

  Fly   370 MGIPVGKLSLYTALAGIKPSQCLPITLDVGTNTESILEDPLYIGLRERRATGDLYDEFIDEFMHA 434
            ||||||||:||:||.|::||.|||:|:|||||.|.:|.|..|||||::||||..|.|.::|||.|
plant   194 MGIPVGKLALYSALGGVRPSACLPVTIDVGTNNEKLLNDEFYIGLRQKRATGQEYSELLNEFMSA 258

  Fly   435 CVRRFGQNCLIQFEDFANANAFRLLSKYRDSFCTFNDDIQGTASVAVAGLLASLKIKKTQLKDNT 499
            ..:.:|:..|||||||||.|||.||:||.|:...|||||||||||.:|||:::.|:..:.|.::|
plant   259 VKQNYGEKVLIQFEDFANHNAFELLAKYSDTHLVFNDDIQGTASVVLAGLVSAQKLTNSPLAEHT 323

  Fly   500 LLFLGAGEAALGIANLCLMAM-KVEGLTEEEAKARIWMVDSRGVITRDRPKGGLTEHKLHFAQLH 563
            .||||||||..|||.|..:.| |....:.||::.:||:|||:|:|...| |..|.:.|..:|..|
plant   324 FLFLGAGEAGTGIAELIALYMSKQMNASVEESRKKIWLVDSKGLIVNSR-KDSLQDFKKPWAHEH 387

  Fly   564 EPIDTLAEAVRKVRPNVLIGAAAQGGAFNQEILELMADINETPIIFALSNPTSKAECTAEEAYTY 628
            ||:..|..|::.::|.||||::..|.:|.:|::|.|:.|||.|:|.||||||:::|||||||||:
plant   388 EPVKDLLGAIKAIKPTVLIGSSGVGRSFTKEVIEAMSSINERPLIMALSNPTTQSECTAEEAYTW 452

  Fly   629 TKGRCIFASGSPFAPVTYNNKKFYPGQGNNSYIFPGVALGVLCAGMLNIPEQVFLVAAERLAELV 693
            :|||.||||||||.||.|..|.|...|.||:|||||..||::.:|.:.:.:.:.|.|||.||..|
plant   453 SKGRAIFASGSPFDPVEYEGKVFVSTQANNAYIFPGFGLGLVISGAIRVHDDMLLAAAEALAGQV 517

  Fly   694 SKDDLAKGSLYPPLSSIVSCSMAIAERIVEYAYKNGLATVRPEPVNKLAFIKAQMYDLDY 753
            ||::..||.:||..|||...|..||..:...||:.|||...|.|.:.:...::.||...|
plant   518 SKENYEKGMIYPSFSSIRKISAQIAANVATKAYELGLAGRLPRPKDIVKCAESSMYSPTY 577

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MenNP_524880.2 PLN03129 213..757 CDD:215594 277/542 (51%)
malic 282..463 CDD:278802 113/180 (63%)
NAD_bind_1_malic_enz 473..750 CDD:133454 130/277 (47%)
NADP-ME1NP_179580.1 PLN03129 4..581 CDD:215594 284/580 (49%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 263 1.000 Domainoid score I469
eggNOG 1 0.900 - - E1_COG0281
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 559 1.000 Inparanoid score I249
OMA 1 1.010 - - QHG60768
OrthoDB 1 1.010 - - D435571at2759
OrthoFinder 1 1.000 - - FOG0000475
OrthoInspector 1 1.000 - - mtm1109
orthoMCL 1 0.900 - - OOG6_100205
Panther 1 1.100 - - O PTHR23406
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X340
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1312.840

Return to query results.
Submit another query.