DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Men and NAD-ME1

DIOPT Version :9

Sequence 1:NP_524880.2 Gene:Men / 47173 FlyBaseID:FBgn0002719 Length:763 Species:Drosophila melanogaster
Sequence 2:NP_178980.1 Gene:NAD-ME1 / 815842 AraportID:AT2G13560 Length:623 Species:Arabidopsis thaliana


Alignment Length:658 Identity:242/658 - (36%)
Similarity:364/658 - (55%) Gaps:80/658 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   142 LSLSSRHHWNQLQSSLHALHHQQQQQQQQLRSYSSTSETNLEDKMSKPDSKLDKYAQRDRLGLWG 206
            |.|||        |||..:.|::......:||: :|||                           
plant     7 LRLSS--------SSLSRILHRRILYSSAVRSF-TTSE--------------------------- 35

  Fly   207 TGDNEVVGSLSGFTRLLDKRYSKGLAFTHEERQQLGIHGMLPYVVREPSEQVEHCRALLARLDQD 271
             |....:....|...|.|..::||.|||..||.:|.:.|:||..|.:..:|:......|.||::.
plant    36 -GHRPTIVHKQGLDILHDPWFNKGTAFTMTERNRLDLRGLLPPNVMDSEQQIFRFMTDLKRLEEQ 99

  Fly   272 ----------LDKYMYLISLSERNERLFYNVLSSDIAYMMPLVYTPTVGLACQRYSLIHQNAKGM 326
                      |.|:..|..|.:|||.::|.||.::|....|:||||||||.||.||.:.:..:||
plant   100 ARDGPSDPNALAKWRILNRLHDRNETMYYKVLINNIEEYAPIVYTPTVGLVCQNYSGLFRRPRGM 164

  Fly   327 FISIKDKGHIYDVLKNWPETDVRAIVVTDGERILGLGDLGANGMGIPVGKLSLYTALAGIKPSQC 391
            :.|.:|:|.:..::.|||...|..||||||.|||||||||.:|:||.||||.||.|.|||.|.:.
plant   165 YFSAEDRGEMMSMVYNWPAEQVDMIVVTDGSRILGLGDLGVHGIGIAVGKLDLYVAAAGINPQRV 229

  Fly   392 LPITLDVGTNTESILEDPLYIGLRERRATGDLYDEFIDEFMHACVRRFGQNCLIQFEDFANANAF 456
            ||:.:|||||.|.:..||:|:||::||...|.|.:.|||||.|...|: .:.::|||||.:..||
plant   230 LPVMIDVGTNNEKLRNDPMYLGLQQRRLEDDDYIDVIDEFMEAVYTRW-PHVIVQFEDFQSKWAF 293

  Fly   457 RLLSKYRDSFCTFNDDIQGTASVAVAGLLASLKIKKTQLKD---NTLLFLGAGEAALGIANLCLM 518
            :||.:||.::..||||:||||.||:||||.:::.:...:.|   ..::..|||.|.:|:.|....
plant   294 KLLQRYRCTYRMFNDDVQGTAGVAIAGLLGAVRAQGRPMIDFPKMKIVVAGAGSAGIGVLNAARK 358

  Fly   519 AM-KVEGLTE---EEAKARIWMVDSRGVITRDRPKGGLTEHKLHFAQLHEPID--------TLAE 571
            .| ::.|.||   :.|:::.|:||::|:||..|.  .:......||:..:.::        ||.|
plant   359 TMARMLGNTETAFDSAQSQFWVVDAQGLITEGRE--NIDPEAQPFARKTKEMERQGLKEGATLVE 421

  Fly   572 AVRKVRPNVLIGAAAQGGAFNQEILELMADINET-PIIFALSNPTSKAECTAEEAYTYTKGRCIF 635
            .||:|:|:||:|.:|.||.|::|:||.|.....| |.|||:||||..||||.::|::......||
plant   422 VVREVKPDVLLGLSAVGGLFSKEVLEAMKGSTSTRPAIFAMSNPTKNAECTPQDAFSILGENMIF 486

  Fly   636 ASGSPFAPVTYNNKKF-YPGQGNNSYIFPGVALGVLCAGMLNIPEQVFLVAAERLAELVSKDDLA 699
            ||||||..|.:.|... :..||||.|:|||:.||.|.:|...:.:.:...|:|.||..:|::::.
plant   487 ASGSPFKNVEFGNGHVGHCNQGNNMYLFPGIGLGTLLSGAPIVSDGMLQAASECLAAYMSEEEVL 551

  Fly   700 KGSLYPPLSSIVSCSMAIAERIVEYAYK----NGLATVRPEPVNKL------AFIKAQMYDLDYP 754
            :|.:|||:|.|...:..||..:::.|.:    .|...:....:.||      .:::..|::.:||
plant   552 EGIIYPPISRIRDITKRIAAAVIKEAIEEDLVEGYREMDAREIQKLDEEGLMEYVENNMWNPEYP 616

  Fly   755 RSVPATYK 762
            ..|   ||
plant   617 TLV---YK 621

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MenNP_524880.2 PLN03129 213..757 CDD:215594 225/580 (39%)
malic 282..463 CDD:278802 91/180 (51%)
NAD_bind_1_malic_enz 473..750 CDD:133454 103/303 (34%)
NAD-ME1NP_178980.1 PLN03129 25..619 CDD:215594 231/625 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0281
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG60768
OrthoDB 1 1.010 - - D435571at2759
OrthoFinder 1 1.000 - - FOG0000475
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100205
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X340
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
98.690

Return to query results.
Submit another query.