DRSC/TRiP Functional Genomics Resources

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Protein Alignment Men and me3

DIOPT Version :9

Sequence 1:NP_524880.2 Gene:Men / 47173 FlyBaseID:FBgn0002719 Length:763 Species:Drosophila melanogaster
Sequence 2:NP_001082825.1 Gene:me3 / 492719 ZFINID:ZDB-GENE-041111-294 Length:603 Species:Danio rerio


Alignment Length:537 Identity:309/537 - (57%)
Similarity:394/537 - (73%) Gaps:3/537 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly   218 GFTRLLDKRYSKGLAFTHEERQQLGIHGMLPYVVREPSEQVEHCRALLARLDQDLDKYMYLISLS 282
            |:....:...:||:|||.|||.||||||:||........||.............||||:.|::|.
Zfish    49 GYDITRNPHLNKGMAFTLEERLQLGIHGLLPPCFLSQDVQVLRVMKSYETRSNPLDKYILLMTLQ 113

  Fly   283 ERNERLFYNVLSSDIAYMMPLVYTPTVGLACQRYSLIHQNAKGMFISIKDKGHIYDVLKNWPETD 347
            :|||:|||.||:|||...||:|||||||||||:|.|..:..:|:||:|.|||||..:|.:|||.|
Zfish   114 DRNEKLFYRVLTSDIEEFMPIVYTPTVGLACQQYGLAFRRPRGLFITIHDKGHIATMLNSWPEED 178

  Fly   348 VRAIVVTDGERILGLGDLGANGMGIPVGKLSLYTALAGIKPSQCLPITLDVGTNTESILEDPLYI 412
            ::|||||||||||||||||..|||||||||:||||..|:.|.||||:.|||||:.:::|:|||||
Zfish   179 IKAIVVTDGERILGLGDLGGYGMGIPVGKLALYTACGGVPPQQCLPVLLDVGTDNQTLLDDPLYI 243

  Fly   413 GLRERRATGDLYDEFIDEFMHACVRRFGQNCLIQFEDFANANAFRLLSKYRDSFCTFNDDIQGTA 477
            ||:.:|..|..||:.|||||.|...::|.|||||||||||:||||:|:|||:.:|||||||||||
Zfish   244 GLKHKRVRGKEYDDLIDEFMQAVTDKYGMNCLIQFEDFANSNAFRILNKYRNRYCTFNDDIQGTA 308

  Fly   478 SVAVAGLLASLKIKKTQLKDNTLLFLGAGEAALGIANLCLMAMKVEGLTEEEAKARIWMVDSRGV 542
            ||||||:||:|||.|.:|.|:..:|.||||||||||:|.:|||..||:...||..|||||||:|:
Zfish   309 SVAVAGILAALKITKNKLSDHKFVFQGAGEAALGIAHLLIMAMAKEGIPHAEAAQRIWMVDSKGL 373

  Fly   543 ITRDRPKGGLTEHKLHFAQLHEPIDTLAEAVRKVRPNVLIGAAAQGGAFNQEILELMADINETPI 607
            |.:.|  ..|...|..||..|..|.||.|.|..::|..:||.||.||||.::|::.||..||.||
Zfish   374 IVKGR--SHLNHEKEEFAHDHPHIKTLEEVVETIKPTAIIGVAAIGGAFTEKIIKNMAANNERPI 436

  Fly   608 IFALSNPTSKAECTAEEAYTYTKGRCIFASGSPFAPVTY-NNKKFYPGQGNNSYIFPGVALGVLC 671
            ||||||||||||||||:.||.|:||.||||||||..||. :.:.||||||||:|:||||||||:.
Zfish   437 IFALSNPTSKAECTAEQCYTLTEGRGIFASGSPFKKVTLADGRSFYPGQGNNAYVFPGVALGVIA 501

  Fly   672 AGMLNIPEQVFLVAAERLAELVSKDDLAKGSLYPPLSSIVSCSMAIAERIVEYAYKNGLATVRPE 736
            .|:.:|.:.:||..||.::|:|:::.||:|.|||||.:|...|..||.:||::|||.|:|:..||
Zfish   502 CGVRHISDDIFLTTAEAISEMVTEEHLAEGRLYPPLKTIREVSFKIAVKIVDHAYKQGIASWYPE 566

  Fly   737 PVNKLAFIKAQMYDLDY 753
            |.:|.|||.:.:|:.||
Zfish   567 PKDKEAFILSHVYNSDY 583

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MenNP_524880.2 PLN03129 213..757 CDD:215594 309/537 (58%)
malic 282..463 CDD:278802 117/180 (65%)
NAD_bind_1_malic_enz 473..750 CDD:133454 156/277 (56%)
me3NP_001082825.1 PLN03129 47..587 CDD:215594 309/537 (58%)
malic 113..294 CDD:278802 117/180 (65%)
NAD_bind_1_malic_enz 304..580 CDD:133454 156/277 (56%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170595263
Domainoid 1 1.000 292 1.000 Domainoid score I1493
eggNOG 1 0.900 - - E1_COG0281
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG60768
OrthoDB 1 1.010 - - D334471at33208
OrthoFinder 1 1.000 - - FOG0000475
OrthoInspector 1 1.000 - - mtm6390
orthoMCL 1 0.900 - - OOG6_100205
Panther 1 1.100 - - O PTHR23406
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2182
SonicParanoid 1 1.000 - - X340
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1413.750

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