DRSC/TRiP Functional Genomics Resources

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Protein Alignment Men and Me1

DIOPT Version :10

Sequence 1:NP_524880.2 Gene:Men / 47173 FlyBaseID:FBgn0002719 Length:763 Species:Drosophila melanogaster
Sequence 2:NP_036732.3 Gene:Me1 / 24552 RGDID:3074 Length:572 Species:Rattus norvegicus


Alignment Length:545 Identity:326/545 - (59%)
Similarity:402/545 - (73%) Gaps:3/545 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly   218 GFTRLLDKRYSKGLAFTHEERQQLGIHGMLPYVVREPSEQVEHCRALLARLDQDLDKYMYLISLS 282
            |:....|...:|.||||.||||||.|||:||..:.....||........||:.|.|:|:.|:.|.
  Rat    15 GYLLTRDPHLNKDLAFTLEERQQLNIHGLLPPCIVNQEIQVLRVIKNFERLNSDFDRYLLLMDLQ 79

  Fly   283 ERNERLFYNVLSSDIAYMMPLVYTPTVGLACQRYSLIHQNAKGMFISIKDKGHIYDVLKNWPETD 347
            :|||:|||:||.|::...||:|||||||||||:|||..:..:|:||||.|||||..||..|||..
  Rat    80 DRNEKLFYSVLMSNVEKFMPIVYTPTVGLACQQYSLAFRKPRGLFISIHDKGHIASVLNAWPEDV 144

  Fly   348 VRAIVVTDGERILGLGDLGANGMGIPVGKLSLYTALAGIKPSQCLPITLDVGTNTESILEDPLYI 412
            |:|||||||||||||||||.||||||||||:||||..|:.|.|||||||||||..|.:|:|||||
  Rat   145 VKAIVVTDGERILGLGDLGCNGMGIPVGKLALYTACGGVNPQQCLPITLDVGTENEELLKDPLYI 209

  Fly   413 GLRERRATGDLYDEFIDEFMHACVRRFGQNCLIQFEDFANANAFRLLSKYRDSFCTFNDDIQGTA 477
            |||.||..|..||.|:||||.|...::|.|||||||||||.||||||:|||:.:|||||||||||
  Rat   210 GLRHRRVRGPEYDAFLDEFMEAASSKYGMNCLIQFEDFANLNAFRLLNKYRNKYCTFNDDIQGTA 274

  Fly   478 SVAVAGLLASLKIKKTQLKDNTLLFLGAGEAALGIANLCLMAMKVEGLTEEEAKARIWMVDSRGV 542
            |||||||||:|:|.|.:|.|.|:||.||||||||||:|.:|||:.|||::|:|:.:||:|||:|:
  Rat   275 SVAVAGLLAALRITKNKLSDQTVLFQGAGEAALGIAHLIVMAMEKEGLSKEKARQKIWLVDSKGL 339

  Fly   543 ITRDRPKGGLTEHKLHFAQLHEPIDTLAEAVRKVRPNVLIGAAAQGGAFNQEILELMADINETPI 607
            |.:.|  ..|||.|..||..||.:..|...|:|::|..|||.||.||||.::||:.||..||.||
  Rat   340 IVKGR--ASLTEEKEVFAHEHEEMKNLEAIVQKIKPTALIGVAAIGGAFTEQILKDMAAFNERPI 402

  Fly   608 IFALSNPTSKAECTAEEAYTYTKGRCIFASGSPFAPVTY-NNKKFYPGQGNNSYIFPGVALGVLC 671
            |||||||||||||:|||.|..||||.||||||||.|||. :.:..:||||||||:||||||||:.
  Rat   403 IFALSNPTSKAECSAEECYKVTKGRAIFASGSPFDPVTLPDGRTLFPGQGNNSYVFPGVALGVVA 467

  Fly   672 AGMLNIPEQVFLVAAERLAELVSKDDLAKGSLYPPLSSIVSCSMAIAERIVEYAYKNGLATVRPE 736
            .|:.:|.:.|||..||.:::.||...|.:|.|||||::|...|:.||.:||:.|||..:|||.||
  Rat   468 CGLRHINDSVFLTTAEVISQQVSDKHLEEGRLYPPLNTIRDVSLKIAVKIVQDAYKEKMATVYPE 532

  Fly   737 PVNKLAFIKAQMYDLDYPRSVPATY 761
            |.||..|:.:|||..:|.:.:|..|
  Rat   533 PQNKEEFVSSQMYSTNYDQILPDCY 557

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MenNP_524880.2 PLN03129 213..757 CDD:215594 324/539 (60%)
Me1NP_036732.3 PLN03129 11..551 CDD:215594 324/537 (60%)

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