DRSC/TRiP Functional Genomics Resources

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Protein Alignment ebo and xpo6

DIOPT Version :10

Sequence 1:NP_001284739.1 Gene:ebo / 47141 FlyBaseID:FBgn0266572 Length:1054 Species:Drosophila melanogaster
Sequence 2:NP_919355.1 Gene:xpo6 / 333980 ZFINID:ZDB-GENE-030131-5912 Length:1128 Species:Danio rerio


Alignment Length:1163 Identity:294/1163 - (25%)
Similarity:514/1163 - (44%) Gaps:180/1163 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 ASLTTVEGLLQEFYQPSTSNARKREIETNLLAFKSQPEAWQLCLRVATSSDTTENQFLWFFSTST 68
            |||..:|.|:.||:...|:|.||||||..|.:|..||.:|:..|...::|   .|:::..:|.:.
Zfish     6 ASLRALESLMTEFFHSCTTNDRKREIEELLNSFAGQPGSWRHWLYFLSNS---RNEYVMMYSLTV 67

  Fly    69 LEHTITRRWTQLTSTDKTLLRETLWNSYAQLVATPN-VAKRH-------RDTLAQLIALLGKREF 125
            .|:.:.:.|..:.|.||..||..|          |. :..:|       |:.|.::|..:|::::
Zfish    68 FENLVNKMWVGVASEDKAELRSCL----------PKLLLSQHALLPFFIRNKLCKVIVDIGRQDW 122

  Fly   126 PEQDPNYMQHCMELTK--TRFQLGINLLKITSEEVVSNRGDLTTEWKQYFYSCISMCVPDVLDLV 188
            |....::..:.::|.:  :...||:.|||:||||:|..|.||:...|......:...:|.||:|:
Zfish   123 PMFYHDFFSNTLQLVQSPSLASLGLVLLKMTSEELVCPREDLSVARKDELKKLLLDQIPTVLNLL 187

  Fly   189 TKYLLIAVCHINGKDIQTTIPNTLMDFS---LTSALPNDNQLSSSILDLLG--CVQHLVSWI-RT 247
            |: :|..|...:...:.|..|:.....|   |..:.|......|..|.||.  |:.||.||| .:
Zfish   188 TR-ILETVWDKHSVTVTTPPPSPTSRESGVMLGDSTPMVLDAESGALCLLALECLAHLFSWIPLS 251

  Fly   248 ELISEYFLMSILDLSQW------------------RPAHEP--------------------ISLA 274
            ..|:...|.||...:::                  .|...|                    :.:.
Zfish   252 SSITPSLLASIFHFARFGCQQPIKTKPLPTSNGDSAPGSLPANGGGHCRTGQIVGHAERARLGVM 316

  Fly   275 ALSVLNELL-----------YLQKPLPFPGPLMGGVTSLLEQHNN-----NRRQ--SEMYSDKFR 321
            |::.:|||:           :|.:.......|:..:|: ...|.|     :|.|  .|.|.:||.
Zfish   317 AMNCINELMCKNCVPVDFEEFLLRMFQQTFYLLQRLTN-THSHTNTHTIKSRLQDLDESYVEKFT 380

  Fly   322 ELLRLYTTKYAAKLMQEPDL-LETFLNLLYSCTTELHGALDFTEKLEIW--------TPIIKGIA 377
            :.|||:.:.:..::...... |..||.||:..|........:...|:||        |.|...:|
Zfish   381 DFLRLFVSVHLRRIESNAQFPLVEFLALLFKYTFNQPSHEGYLACLDIWSVFLDYLTTKIRSRLA 445

  Fly   378 QHPAKITRYNNVLTQLVDEIMRRTQFEANKPELEVLDNELMEDDTSATEWQQFLDQCFESLAL-- 440
            ...:.|.||.:.|..|:.|::.|.||..|:.:||.||:|.::|| ..||||::|.|..|.:|.  
Zfish   446 DRDSVINRYKDALVLLLREVLNRIQFRLNQSQLEELDDETLDDD-QQTEWQRYLRQSLEVVARVM 509

  Fly   441 -LANTRGAHIVFAQVYNHWSRPQMYLLSLEHALDHGSAR----SYEA-ARKLKGANVGEILRDFA 499
             |..::...::|..:....   .:||...:..:..|::|    :.|| .|||..|     |||.:
Zfish   510 ELLPSQTFSVLFPVLQEDL---DVYLGLQQFIVRSGTSRRLNITAEADCRKLHCA-----LRDLS 566

  Fly   500 TVCQAVVRLAPLM--DSSTAAPGVADEMECQLQMLSDSLLQTLQLLASNRLYSGGSEMD------ 556
            ::.|||.|||...  |..||             ..:|: |..:|.|.....|  ||::.      
Zfish   567 SLLQAVGRLAEFFTGDVFTA-------------RFNDA-LAIVQRLVEVSCY--GSQISLYDVEM 615

  Fly   557 --KATFQTDLDNLYAQVLLAMRSIFPLTKAMSGEELLHRLFAILGSIFACNGSLTAASPIVQ--- 616
              .:..:.||.:::||.|.|:::.........||  :.|.......:.....|:.||||::.   
Zfish   616 AVPSVLKPDLIDVHAQSLAALQAYSHWLAQFCGE--VQRQQDQTQFVDLITSSMAAASPLINGKV 678

  Fly   617 -----QAASELLLFISTVIRPKCLLDIPQIQSLLQ-AGSRLGAQLPRQVCINVHISLVSYMVLPW 675
                 .:|..||:.::|.:||..|:.:|.:|::.. .......:||::..:.|..:|.:.::|||
Zfish   679 PEKLLLSACHLLVSMATTVRPVFLVSLPAVQNIFNLITENHNHRLPQEAHVLVCRALSNMLLLPW 743

  Fly   676 KSVPEQQQEYPRRLWMLREYVQGLAQNFLDLDLGQANESKVAATTLSLLGTFTALIEYFKATGGN 740
            .|:||.:|::|.|.......:..|.|.:..|.....:.....|.....|.....|::........
Zfish   744 PSLPEGEQQWPNRSANHARLISSLTQQYRLLPRPPNHHHTSKAVIQQTLCVLRDLVDSISGEATK 808

  Fly   741 AKDMLASTFKPILTKALMIFNNFGQSSIAMAITVAEFSLSMLRTLPTHLGAQFIKEMITLFISVS 805
            ::.:...:.:..:..:|.:|..|.|.. .:...:..|.|::.:.|...:|..|.:::|..|:|:.
Zfish   809 SRQICYHSLQESVQVSLALFPLFIQQP-EVTDEMLSFFLTLFQALRVQMGVAFTEQIIQTFLSMF 872

  Fly   806 SREQLTLSRL-------AVMEKILQMFKLIVEQPGSASLGLLPSILDFSTQQILPLLQQQNAATD 863
            :||||.:..|       .|::|.|::.:::|::||.....||||||.....|:.|::.:::....
Zfish   873 TREQLAVGILQEGSSGSKVVQKFLKILQVVVQEPGQTFKPLLPSILSLCLDQVYPIVAERSCPDV 937

  Fly   864 NSEITSLLYALFDSVLTCKWQFFYKNQLSNGHSGGGSGNFNCSDNLHPAHFMAILNAYGQMLVSG 928
            .:|:..||:    .:|...|:||:|:.:.:  |...||.....:|  .|.|.|.:.|:||..:. 
Zfish   938 RAEMFELLF----QILHQNWRFFFKSSVLS--SVQRSGAEELMEN--QAQFTAAMQAFGQSFLQ- 993

  Fly   929 TDPSNVRSVLFSMQNVNERSRLYQRALFKEQLLASFQRALLNLLLSGEGSLHFDMIAQALYAMGQ 993
            .|....:..|..::.:|.:.:||.|.||:..:|..|...||.:||.....|..:.|..|||.|..
Zfish   994 PDIHIFKQNLSYLEVLNTKHKLYHRKLFRNAMLFHFINVLLQVLLHKSHDLLQEDITLALYNMAA 1058

  Fly   994 VDRRQLLESFVHASL-------PVAQTSLEEICQTNVLPFIVQDIPTFTQKLTQLMQD 1044
            ||......||:...|       |..:|:|..    |..|  .:|:|:|:|.:.:::.|
Zfish  1059 VDFSAFYSSFLPEFLNGCQGLDPHQRTTLAR----NFTP--ERDLPSFSQGVYRIVND 1110

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eboNP_001284739.1 CRM1 12..>368 CDD:227432 103/428 (24%)
IBN_N 29..98 CDD:197981 19/68 (28%)
xpo6NP_919355.1 IBN_N 31..97 CDD:197981 20/78 (26%)
Xpo1 105..>198 CDD:462459 27/93 (29%)

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