DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ebo and xpo6

DIOPT Version :9

Sequence 1:NP_001284739.1 Gene:ebo / 47141 FlyBaseID:FBgn0266572 Length:1054 Species:Drosophila melanogaster
Sequence 2:XP_004918081.2 Gene:xpo6 / 100491765 XenbaseID:XB-GENE-493618 Length:1139 Species:Xenopus tropicalis


Alignment Length:1190 Identity:285/1190 - (23%)
Similarity:507/1190 - (42%) Gaps:223/1190 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 ASLTTVEGLLQEFYQPSTSNARKREIETNLLAFKSQPEAWQLCLRVATSSDTTENQFLWFFSTST 68
            |||..:|.|:.||:...|||.||||||:.|..|..|..||:.|....:.|   .|.::..:|.|.
 Frog     6 ASLRALESLMSEFFHNGTSNERKREIESLLNNFAQQLGAWRFCFYFLSQS---HNDYVLMYSLSV 67

  Fly    69 LEHTITRRWTQLTSTDKTLLRETLWNSYAQLVATPN-VAKRHR-------DTLAQLIALLGKREF 125
            .|:.|.:.|..:.|.:|..:|.:|          |. :..:|:       :.|.::|..:|::::
 Frog    68 FENLINKMWLGVPSQEKMEIRSSL----------PKLLLSQHKTLPSFICNKLCKVIVDMGRQDW 122

  Fly   126 PEQDPNYMQHCMEL--TKTRFQLGINLLKITSEEVVSNRGDLTTEWKQYFYSCISMCVPDVLDLV 188
            |....::..:.::|  |.:...||:.:||..|||:...|.||:...|:.....:...||.||.|:
 Frog   123 PMFYHDFFTNILQLIQTPSTTPLGLIMLKTASEELACPREDLSVARKEELRKLLLEQVPTVLGLL 187

  Fly   189 TKYLLIAVCHINGKDIQTTIPNTLMD-FSLTSALPNDNQLSSSILDLLG---------------- 236
            |..|                 .::.| .|:|:|.|..:..:|...|||.                
 Frog   188 TGVL-----------------ESIWDKHSITAATPPPSPTASDTDDLLSNLIHTPNLTKQLSQPP 235

  Fly   237 ----------------CVQHLVSWI-RTELISEYFLMSILDLSQW----RPAH------------ 268
                            |:.||.||| .:..|:...|.:|...::.    |..|            
 Frog   236 PSLEAESERVCALALECLSHLFSWIPLSASITPTLLTTIFHFARLGCDARSRHTSSITTNTTCVV 300

  Fly   269 ------EPISLA--------------ALSVLNELL-----------YLQKPLPFPGPLMGGVTSL 302
                  .|:|.|              |:|.:|||:           ||.:.......|:..:|..
 Frog   301 NGGSSSPPLSSAAHSSQRDRGRLGVLAMSCINELMCKNCVPLEFQEYLLRVCQQTFYLLQRITRE 365

  Fly   303 LEQHNNNRRQSEM---YSDKFRELLRLYTTKYAAKLMQEPDL-LETFLNLLYSCTTELHGALDFT 363
            ...|:...|..|:   |.:||.:.|||:.:.:..::...... :..||.||:..|........:.
 Frog   366 TNAHSVRTRLEELDESYVEKFTDFLRLFVSVHLRRIESNAQFPVVEFLALLFKYTFHQPTHEGYL 430

  Fly   364 EKLEIW--------TPIIKGIAQHPAKITRYNNVLTQLVDEIMRRTQFEANKPELEVLDNELMED 420
            ..|:||        ..|...:....|.|.||.:.|..|:.|::.|.||..|:.:||.||:|.::|
 Frog   431 SCLDIWALFLDYLTNKIRNRLEDREAIIGRYEDALVLLLTEVLNRIQFRYNQTQLEELDDETLDD 495

  Fly   421 DTSATEWQQFLDQCFESLALLANTRGAHIVFAQVYNHWSRPQMYLLSLEHAL-DHGSARSYEAAR 484
            | ..||||::|....|.:|.:......| .|:.:::.........|.|:..| .:|:.:......
 Frog   496 D-QQTEWQRYLRHSLEVVAKIMELLPTH-AFSTLFSALQENLDVYLGLQRCLVTNGNDQRLNVTA 558

  Fly   485 KLKGANVGEILRDFATVCQAVVRLAPLMDSSTAAPGVADEMECQLQMLSDSLLQTLQLLASNRLY 549
            :.....:...|||.:::.|||.|||...        :.|....:.    :..|..::.|....||
 Frog   559 ENDCRRLHCSLRDLSSLLQAVGRLAEYF--------IGDVFGARF----NDALTVVERLVEVTLY 611

  Fly   550 SGGSEMDKATFQT--------DLDNLYAQVLLAMRS-------IFPLTKAMSGEELLHRLFAILG 599
              ||::.....:|        ||.:::||.|.|:::       .:...:..:.|:.:        
 Frog   612 --GSQIKLYNMETAVPSVLKPDLIDVHAQSLAALQAYSHWLARYYSEVQRQNPEQFI-------- 666

  Fly   600 SIFACNGSLTAASPIVQQ--------AASELLLFISTVIRPKCLLDIPQIQSLLQAGSRLGAQ-L 655
            ||.:.  ::.|..|::..        :|..||:.::|.:||..|::||.:|.:....:...|| |
 Frog   667 SIIST--AMEALPPLISSKVQEKLLLSACHLLVSVATTVRPVFLINIPAVQKVFSRVTDSSAQRL 729

  Fly   656 PRQVCINVHISLVSYMVLPWKSVPEQQQEYPRRLWMLREYVQGLAQNFLDLD-------LGQANE 713
            |.:..:.:..:|.:.::|||.:|||.:|::..|.......:..|.:::..|.       .||...
 Frog   730 PEEAQVLLCRALSNVLLLPWPNVPEGEQQWGERSSHHANLLNALTRDYRLLKGSSPPQRKGQLEA 794

  Fly   714 SK-VAATTLSLLGTFTALIEYFKATGGNAKDMLASTFKPILTKALMIFNNF-GQSSIAMAITVAE 776
            :| |...|   ||....::|.....|..::.:...:.:.....:|.:|..: .||.:..  .:..
 Frog   795 TKRVICQT---LGVLRDIVENISGEGTKSRQICYQSLQESAQLSLALFPAYIHQSDVTE--EMLS 854

  Fly   777 FSLSMLRTLPTHLGAQFIKEMITLFISVSSREQLTLSRLA-------VMEKILQMFKLIVEQPGS 834
            |.|::.:.|...:||.|.:::|..|:::.:||||..|.|.       |:||.|::.:::|::||.
 Frog   855 FFLALFQGLRVQMGAPFTEQVIQTFLNMFTREQLAESILQEGSAGCHVVEKFLKILQVVVQEPGQ 919

  Fly   835 ASLGLLPSILDFSTQQILPLLQQQNAATDNSEITSLLYALFDSVLTCKWQFFYKNQLSNGHSGGG 899
            |....|||||....:|:.|::.::.:....:|:..||:.|    |...|::||::.:.......|
 Frog   920 AFKPFLPSILSLCMEQLYPIIAERPSPDVKAELFELLFQL----LHHNWRYFYRSSVLASVQRDG 980

  Fly   900 SGNFNCSDNLHPAHFMAILNAYGQMLVSGTDPSNVRSVLFSMQNVNERSRLYQRALFKEQLLASF 964
            |.    ....:.|.|:.::.|:||..:. .|....|..|..::.:|.:.:||.:.||:..:|..|
 Frog   981 SD----EPMENQAQFVVVMQAFGQSFLQ-PDIHIFRQNLSYLETLNSKHKLYHKKLFQTVMLPQF 1040

  Fly   965 QRALLNLLLSGEGSLHFDMIAQALYAMGQVDRRQLLESFVHASLPVAQTSLE--EICQTNVLP-- 1025
            ...||.:|:.....|..:.|..|:|.|..||    ..:|..|.||...|..:  :..|..||.  
 Frog  1041 VSVLLQVLIHKSHDLLQEEIGIAVYNMASVD----FSTFFSAFLPEFLTGCQGLDTSQKGVLARN 1101

  Fly  1026 -FIVQDIPTFTQKLTQLMQD 1044
             .:.:|:|:|||.:.:|:.|
 Frog  1102 FKMERDLPSFTQSVHRLVND 1121

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eboNP_001284739.1 IBN_N 30..98 CDD:281761 18/67 (27%)
Xpo1 110..259 CDD:285575 41/191 (21%)
xpo6XP_004918081.2 IBN_N 31..97 CDD:197981 20/78 (26%)
Xpo1 103..277 CDD:400614 42/190 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 195 1.000 Domainoid score I3108
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 254 1.000 Inparanoid score I3107
OMA 1 1.010 - - QHG55340
OrthoDB 1 1.010 - - D126286at33208
OrthoFinder 1 1.000 - - FOG0008925
OrthoInspector 1 1.000 - - oto102910
Panther 1 1.100 - - LDO PTHR21452
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1010.080

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