Protein Alignment dup and cdt1

DIOPT Version :9

• Sequence 1: NP_001286451.1
• Gene: dup / 47121
• FlyBaseID: FBgn0000996
• Length: 743
• Species: Drosophila melanogaster
• Sequence 2: NP_595196.1
• Gene: cdt1 / 2540847
• PomBaseID: SPBC428.18
• Length: 444
• Species: Schizosaccharomyces pombe
• Alignment Length: 487
• Identity: 105/487 - (21%)
• Similarity: 192/487 - (39%)
• Gaps: 120/487 - (24%)

  Fly   279 SKRLLFSPAKNGSPVKLVEVPAYKRYASLVESSRAGQ---LPLPYKYRHLL---DVFKGLDSVVA 337
            |...:..|.||....::  :||.||....:::....|   || |.|...:|   .||..:| :..
pombe    45 SNAAIIEPPKNPEDSQI--IPAVKRLKENLDTESLEQNEVLP-PVKNESVLFLEKVFNAVD-ICV 105

  Fly   338 MFH---NRKETITFKKLKPAVQRMLRKNFTETHLAQIKHIYPDAFIFSQVKTRNFGSVSKADYFQ 399
            .||   |.|.  ||..|:..|..:.:.:...||||||..::|::|..:...|.:.|  .:...::
pombe   106 KFHLSINTKP--TFVLLENKVSGLTKISLKITHLAQILTVWPESFAITPCFTIHQG--KRVATYE 166

  Fly   400 LIIAPNVEPLPEQQQSEKPQHFTKINEDDVLASAQSTSMNPHVMTARMQRFQSLLLDRAMRAHDQ 464
            |....|.. |||                                                    .
pombe   167 LSYPRNAN-LPE----------------------------------------------------A 178

  Fly   465 FLRSQDPPIIIEKALTRWHPQFDLESCPEVELSPLPQPPNVEKYSSAKDILSTARNLFNCATPME 529
            |.||    |..::.|.:|.    ||.|.|.|: |..|         .:.:.|.::|..|     |
pombe   179 FSRS----IEFKRRLEKWL----LEHCSETEI-PAQQ---------LQALPSLSKNTVN-----E 220

  Fly   530 RAMDRYEAKLESEKQQAAESNKKTEEQQAGEVTRTSTAIQTSQEVPGISGSSKNPTVPETTNQTE 594
            .::.|   ||..||..:.|....|:..:....|.|:   :.:.|:...|....:.|:.::.|...
pombe   221 SSLVR---KLNLEKSTSRELRIPTQTLEPKFTTNTA---KYANELVSCSMLDSSSTLSKSVNSKI 279

  Fly   595 TAKPTVKDCTVPDAS----SNLLKGLPKSLIEKIRAKQAAKALEAMTRRPSQD--------QEAT 647
            ..|......:|.::|    |:.|.....||.:::|.||  ||:||......::        :|..
pombe   280 NLKSHQSSSSVQNSSRKLTSSQLTLRQSSLFDRVRKKQ--KAMEAKKAEEFKNNLVVHTLAKEKV 342

  Fly   648 KYSRLPELARHLRNVFVTERKGVLTLEVIIKKIQNSFRANLTPQEIEAHLKLLAKELPSWASFH- 711
            .:.|:.:|.....:.:.|:|.  .::..|:..:|.|..::|:|.:....::||:|.||:|.:.:
pombe   343 SFVRIIDLIFVQLSTWPTKRS--FSMSEIVTSMQMSISSSLSPDQCAKAIELLSKALPAWCTINL 405

  Fly   712 --EVRKTMYLKV--AKDMDMNKIIEKLESVAN 739
              .::...:.::  .|....:::||:|::.|:
pombe   406 LGNIQVVTFSRIVNGKPYLRSQLIEELQTKAS 437

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
dup	NP_001286451.1	CDT1	318..500	CDD:285985	41/187 (22%)
		Cdt1_c	610..735	CDD:176572	30/137 (22%)
cdt1	NP_595196.1	CDT1	89..>199	CDD:215014	36/175 (21%)
		CDT1_C	308..403	CDD:293284	25/98 (26%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG4762
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	1	0.900	-	-		OOG6_105773
Panther	1	1.100	-	-	LDO	PTHR28637
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	3	2.900