DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment comt and TRIP13

DIOPT Version :10

Sequence 1:NP_524877.1 Gene:comt / 47091 FlyBaseID:FBgn0000346 Length:745 Species:Drosophila melanogaster
Sequence 2:NP_004228.1 Gene:TRIP13 / 9319 HGNCID:12307 Length:432 Species:Homo sapiens


Alignment Length:457 Identity:89/457 - (19%)
Similarity:163/457 - (35%) Gaps:115/457 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 VGDFPEEIKYADISPAPGQHFIFALEKTVEVPSGYVGFSLVQRKWAMVSINQELEVRPYRFDASS 89
            |||..:.:.....||            ||.|.....|.|..:::...:|:.:.|.    |.:...
Human     5 VGDLKQALPCVAESP------------TVHVEVHQRGSSTAKKEDINLSVRKLLN----RHNIVF 53

  Fly    90 DVITCVSFETDFLQKKTVSQEPYDSDQMAKEFIMQFAGMALTVGQSLVFNFKDKKLLGLAVKSLE 154
            ...|...|:..||.:...|....|::                                |.||..:
Human    54 GDYTWTEFDEPFLTRNVQSVSIIDTE--------------------------------LKVKDSQ 86

  Fly   155 AIDPKSLGEGKDTAMRNVRFGRILGNTVVQFEKAENSSLNLQGKSKGKVVRQSIINPDWDFGKMG 219
            .||..:.    ..|:.           :.|..:...||.||:.:::..:.....:.|..:|    
Human    87 PIDLSAC----TVALH-----------IFQLNEDGPSSENLEEETENIIAANHWVLPAAEF---- 132

  Fly   220 IGGL------DKEFNS-IFRRAFASRVFPPELVEQLGCKHVKGILLYGPPGTGKTLMARQIGTML 277
             .||      |.|..| :......:.:|..:.|........:.:||:||||||||.:.:.:...|
Human   133 -HGLWDSLVYDVEVKSHLLDYVMTTLLFSDKNVNSNLITWNRVVLLHGPPGTGKTSLCKALAQKL 196

  Fly   278 NAR--------EPKIVNGPQILDKYVGESEANVRRLFAEAEEEEKRLGPNSGLHIIIFDEIDAIC 334
            ..|        :...:|...:..|:..||...|.::|.:.::   .:.....|..::.||::::.
Human   197 TIRLSSRYRYGQLIEINSHSLFSKWFSESGKLVTKMFQKIQD---LIDDKDALVFVLIDEVESLT 258

  Fly   335 KQRGSVAGNSGVHDT--VVNQLLTKIDGVDQLNNILVIGMTNRRDMIDEALLRPGRLEVQMEISL 397
            ..|.:....:...|.  |||.:||:||.:.:.:|::::..:|..:.||.|.:  .|.:::..|..
Human   259 AARNACRAGTEPSDAIRVVNAVLTQIDQIKRHSNVVILTTSNITEKIDVAFV--DRADIKQYIGP 321

  Fly   398 PNEQG--------------------RVQILNIHTKRMREFNKINDDVDNKEIAALTKNFSGAELE 442
            |:...                    |.|:|.     :||...|....:|....:|..|....:.|
Human   322 PSAAAIFKIYLSCLEELMKCQIIYPRQQLLT-----LRELEMIGFIENNVSKLSLLLNDISRKSE 381

  Fly   443 GL 444
            ||
Human   382 GL 383

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
comtNP_524877.1 CDC48_N 5..83 CDD:215012 12/57 (21%)
CDC48_2 111..>158 CDD:215011 5/46 (11%)
RecA-like_NSF-SEC18_r1-like 219..395 CDD:410912 43/192 (22%)
CDC48 <220..>606 CDD:273521 57/262 (22%)
SpoVK <526..702 CDD:440232
TRIP13NP_004228.1 McrB 34..>205 CDD:441011 41/226 (18%)
RecA-like_Pch2-like 121..319 CDD:410916 45/207 (22%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.