DRSC/TRiP Functional Genomics Resources

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Protein Alignment comt and spata5l1

DIOPT Version :9

Sequence 1:NP_001259506.1 Gene:comt / 47091 FlyBaseID:FBgn0000346 Length:745 Species:Drosophila melanogaster
Sequence 2:NP_001070056.2 Gene:spata5l1 / 767648 ZFINID:ZDB-GENE-060929-204 Length:748 Species:Danio rerio


Alignment Length:749 Identity:187/749 - (24%)
Similarity:292/749 - (38%) Gaps:213/749 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    92 ITCVSFETDFLQ----KKTVS----QEPYDSDQMAKEFIMQFAGMALTVGQSLVFNFKDKKLLGL 148
            :|||..:. |:|    ||.||    ||..|...:.:..::..:|:...:...||           
Zfish    95 LTCVKLKV-FVQRLEHKKRVSERSLQELLDGIYVHEGHLVDLSGVKAEIRCVLV----------- 147

  Fly   149 AVKSLEAIDPKSLGEGKDTAMRNVRFGRILGNTVVQFEKAENSSLNLQGKSKGKVVRQSIINPDW 213
                 |.::..|...|..||...|....|  .||...::.:               :|....|  
Zfish   148 -----EKVNSGSQRAGLITARTCVDISTI--QTVKHLDRQQ---------------QQVSAAP-- 188

  Fly   214 DFGKMGIGGLDKEFNSIFRRAFASRVFP---PELVEQLGCKHVKGILLYGPPGTGKTLM----AR 271
                  :||::..|.|:....    .||   |..:.|||....:|:||.||||.||||:    |:
Zfish   189 ------LGGMEDVFASLKEMI----TFPLRYPGSLRQLGLSCPRGLLLIGPPGVGKTLLVRCVAK 243

  Fly   272 QIGTMLNAREPKIVNGPQILDKYVGESEANVRRLFAEAEEEEKRLGPNSGLHIIIFDEIDAICKQ 336
            .||..|     ..||||::.....||||.|:||:|     |:.|...:.|..:::.||||::|.:
Zfish   244 DIGATL-----VTVNGPEVTGSRPGESEENLRRVF-----EQARDAADDGPCVLLIDEIDSLCPR 298

  Fly   337 RGSVAGNSGVHDTVVNQLLTKIDGVDQLNNILVIGMTNRRDMIDEALLRPGRLEVQMEISLPNEQ 401
            |  ...:|...:.:|.||||.:|.:......::||.||:.|.:|.||.||||.:.::.|.:|:..
Zfish   299 R--TGSSSAPENRLVAQLLTLMDAIGSHEGFVIIGATNQPDSLDPALRRPGRFDREVIIGVPSLL 361

  Fly   402 GRVQILNIHTKRMREFNKINDDVDNKEIAALTKNFSGAELEGLVRAAQSSAMNRLIKADAKVTVD 466
            .|..||....:.|    .::.|||...:|.:|..:.||:|..|.|.|...|| |..:..|.   :
Zfish   362 QRRSILKCVCREM----PLSPDVDLNTLAEMTCGYVGADLSALSREAALQAM-RHSQMGAS---E 418

  Fly   467 PEAMEKLKVNRDDFLHSLEH-------------DIKPAFGTAQEILDNMLARGVINW---GAPVS 515
            |.:|:       .|:.:|.|             |.||                 |.|   |.   
Zfish   419 PVSMQ-------HFMQALRHVQPSCLRSSIGATDFKP-----------------IGWEQIGG--- 456

  Fly   516 NLLEDGMLYVQQA-----KAPES------SGLVSVLVAGAPNSGKTALAAQLAKMSDFPFVKVCS 569
              |||..|.::|:     :.||:      |....||:.|.|...||.|....|..|...|..:..
Zfish   457 --LEDVKLKLKQSIEWPMRFPEAFVRLGVSRPRGVLLYGPPGCAKTTLVKAAASSSHCSFFSLSG 519

  Fly   570 PEDMVGYT-ESAKCLHIRKIFDDAYRSMLSCIVVDNVERLLDYGSIGPRYS-NMTLQALLVLLKK 632
            .|....|. :|.|.|  .::|..|.....|.:.:|.|:.::.....|...| ::..|.|.|||.:
Zfish   520 AELFSPYVGDSEKTL--AQLFAQARACAPSIVFLDEVDSMVGSREDGSSSSHSVQSQVLSVLLTE 582

  Fly   633 QPPKG----------RKLLILCTSSRREV-LEEMEM----------------------------- 657
            ....|          ||:.:|....:.:| |.:||:                             
Zfish   583 LDGVGVRTLERRSTCRKIALLEGGDQEDVRLHQMELQEVCNKDVLIVAATNRPEALDSALLRPGR 647

  Fly   658 -----------LTAFTSVLHVPNLSKPDHVLAVLEN----TDIFSKGEIQAIGKKMA-------- 699
                       |.|..:||.:...|.|.|....||:    |::||..:::.:.|:.|        
Zfish   648 LDQIIYVPPPDLQARLAVLRICTKSVPLHQDVCLEDLAAQTELFSGADLENLCKEAALLALREDG 712

  Fly   700 ------GKRVFIGIKKLLGLIDMARQTEQSQRAI 727
                  .::.|:   |.|.::..:...||.|:.|
Zfish   713 LAVSCVRQKYFL---KALQMLSPSLSAEQLQQNI 743

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
comtNP_001259506.1 CDC48_N 5..83 CDD:215012
CDC48_2 111..>158 CDD:215011 5/46 (11%)
SpoVK 242..699 CDD:223540 147/544 (27%)
AAA 256..397 CDD:278434 55/144 (38%)
AAA 539..668 CDD:278434 39/181 (22%)
spata5l1NP_001070056.2 CDC48 13..740 CDD:273521 185/744 (25%)
AAA 224..357 CDD:278434 55/144 (38%)
AAA 489..655 CDD:278434 35/167 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0464
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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