DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment comt and Iqca

DIOPT Version :9

Sequence 1:NP_001259506.1 Gene:comt / 47091 FlyBaseID:FBgn0000346 Length:745 Species:Drosophila melanogaster
Sequence 2:NP_001355651.1 Gene:Iqca / 74918 MGIID:1922168 Length:838 Species:Mus musculus


Alignment Length:703 Identity:142/703 - (20%)
Similarity:252/703 - (35%) Gaps:207/703 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   141 KDKKLLG--LAVKSLEAIDPKSLGEGKDTAMRNVR----------------FGRILGNTVVQFEK 187
            |:.||||  |....|.|:..:.:..|.....:.|:                |..: .:.:||.::
Mouse   194 KEMKLLGHRLLDTKLAALQIQKVWRGFHQCKKTVKEREEEMVFLGMKPSPLFNEV-SDAIVQSKQ 257

  Fly   188 AENSSLNLQGKSKGKVVRQSIINPDWDFGKMGIGGLDKEFNSIFRRAF-----ASRVFPPELVEQ 247
            ..|....:|.|.: :..:::::|...|...:....:.:......|:.|     .:..||....|:
Mouse   258 VTNLRDEVQLKHE-QDYQEALVNIKEDLKMLEGPDIKEHLQDQIRQWFIECRNLTGTFPDYPNEE 321

  Fly   248 LGCKHVKGILLYGPPGTGKTLMARQIGTMLNAREPKIVNGPQILD------------KYVGESEA 300
            .|     |..|.....|.:.:|...|.|  ...|.|:....:..|            |...|.:.
Mouse   322 DG-----GSALIFSNKTPEQVMGDIIAT--QEEEEKLKKKKKKEDKENKGKKGKKEKKEKKEKKV 379

  Fly   301 NVRRLFAEAEEEEKRLGPNSGLHIIIFDEIDAICKQRGSVAGNSGVHDTVVNQLLTKIDGVDQLN 365
            :::....:.|:||.::.|:  |.:.:.:|            |||...|..:|:        |:..
Mouse   380 SLKEKAMKDEDEEWKMSPS--LFLQLMEE------------GNSLYKDIWLNK--------DESW 422

  Fly   366 NILVIGMTNRRDMIDEALLRPGRLEVQMEISLPNEQGRVQILNIHTKRMREFN-KINDDVD---- 425
            |.       .:|...|.:....|.|::|||       |||:..:..:.::... .:|.:::    
Mouse   423 NF-------PQDYDPELIKEEKRKELEMEI-------RVQVDELMRQELKNLKLAVNREMEIPPR 473

  Fly   426 NKEIAALTKNFSGAELEGLVRAAQSSAMNRLIKADAKV-TVDPEAMEK------LKVNRDDFLHS 483
            .|:.....|...|       |..:.....:.:.||..: ::..|.:||      ||||..|::..
Mouse   474 QKKGKKKNKGRKG-------RRGKRGKKEKDLTADRTIESLYQELVEKGLLIQALKVNLSDYIGE 531

  Fly   484 LEHDIKPAFGTAQEILDNMLARGVINWGAPVSNLLE-------DGMLYVQQAKAPESSGLV-SVL 540
            ..:            |...|.:..|.   |:.:||:       .|:|.:..|:..|.:.|| |:|
Mouse   532 YSY------------LGTTLRQVAIE---PMPSLLDVRQLITLYGILPLGSAEVHERAPLVKSLL 581

  Fly   541 VAGAPNSGK--------TALAAQLAKMS------DFPFVKVCSPEDMVGYTESAKCLHIRKIFDD 591
            :||....||        |...|.|..:|      .:|           |.|.....:|:  :|..
Mouse   582 LAGPSGVGKKMLVHAICTETGANLFNLSALNIAGKYP-----------GKTGLQMMIHL--VFKV 633

  Fly   592 AYRSMLSCIVVDNVERLLDYGSI-------GPRYSNMTLQALLVLLKKQPPKGRKLLILCTSSRR 649
            |.:...|.:.:.:.|:.. |..:       .|:.....|..||.|||   |..| :||:.|:.|.
Mouse   634 ARQLQPSVVWIQDTEKTF-YKKVPQAEKRFEPKRLKRYLPKLLKLLK---PDDR-ILIVGTTHRP 693

  Fly   650 EVLEEMEMLTAFTSVLHVPNLSKPD----HVL---AVLEN----------------TDIFSKGEI 691
            ...|.......:..::.||   :||    :||   .:|.|                ||.|::|:|
Mouse   694 FDAELQPFCRVYQKIILVP---RPDYASRYVLWKEIILRNGGKLTNSLNISCLSKVTDGFTQGQI 755

  Fly   692 QAIGKKMAGKRVFIGIKKLLGLIDMARQTEQSQRAIKFLSKM--------EEE 736
            ..:            ||.:|....:.:|..:...||:|::.|        |||
Mouse   756 VQV------------IKDVLTERRLRQQAHKPLTAIEFITMMTNMNPVYREEE 796

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
comtNP_001259506.1 CDC48_N 5..83 CDD:215012
CDC48_2 111..>158 CDD:215011 8/18 (44%)
SpoVK 242..699 CDD:223540 109/532 (20%)
AAA 256..397 CDD:278434 30/152 (20%)
AAA 539..668 CDD:278434 32/149 (21%)
IqcaNP_001355651.1 SpoVK <578..797 CDD:223540 57/252 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0464
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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