DRSC/TRiP Functional Genomics Resources

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Protein Alignment comt and Fignl2

DIOPT Version :9

Sequence 1:NP_001259506.1 Gene:comt / 47091 FlyBaseID:FBgn0000346 Length:745 Species:Drosophila melanogaster
Sequence 2:NP_001201840.1 Gene:Fignl2 / 668225 MGIID:3646919 Length:644 Species:Mus musculus


Alignment Length:202 Identity:58/202 - (28%)
Similarity:95/202 - (47%) Gaps:29/202 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   256 ILLYGPPGTGKTLMARQIGTMLNAREPKIVNGPQILDKYVGESEANVRRLFAEAEEEEKRLGPNS 320
            :|.:||.|.||.|:.|.:.|.|.|...:: .|..:......|....::..||.|     |..|.:
Mouse   423 VLFFGPRGCGKALLGRCLATRLGATLLRL-RGAGLAASGAVEGARLLQAAFAAA-----RCRPPA 481

  Fly   321 GLHIIIFDEIDAICKQRGSVAGNSGVHDTVVNQLLTKIDGV--DQLNNILVIGMTNRRDMIDEAL 383
               :::..|:||:...|...|       ::...|||.:||.  .:.:.:||:|.|:|...:|||.
Mouse   482 ---VLLISELDALLPARDDGA-------SLRAPLLTCLDGSCGARADGVLVVGTTSRPAALDEAT 536

  Fly   384 LRPGRLEVQMEISLPNEQGRVQILNIHTKRMREFNKINDDVDNKEIAAL---TKNFSGAELEGLV 445
            .|  |..::..::||:...|.|||      .|...:....::.:|:|||   |:.|||.||..|.
Mouse   537 RR--RFALRFYVALPDGAARGQIL------QRALAQQGCALNERELAALVQGTQGFSGGELGQLC 593

  Fly   446 RAAQSSA 452
            :.|.:.|
Mouse   594 QQAAAEA 600

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
comtNP_001259506.1 CDC48_N 5..83 CDD:215012
CDC48_2 111..>158 CDD:215011
SpoVK 242..699 CDD:223540 58/202 (29%)
AAA 256..397 CDD:278434 38/142 (27%)
AAA 539..668 CDD:278434
Fignl2NP_001201840.1 SpoVK <381..638 CDD:223540 58/202 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0464
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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