DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment comt and fign

DIOPT Version :9

Sequence 1:NP_001259506.1 Gene:comt / 47091 FlyBaseID:FBgn0000346 Length:745 Species:Drosophila melanogaster
Sequence 2:XP_021334341.1 Gene:fign / 553599 ZFINID:ZDB-GENE-050522-339 Length:747 Species:Danio rerio


Alignment Length:496 Identity:117/496 - (23%)
Similarity:220/496 - (44%) Gaps:83/496 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 YADISPAP--G------QHFIFALEKTVEVPSGYVGFSLVQRKWAMVSI-----NQELE-VRPYR 84
            :|.|:|.|  |      :...|.:....::.|.|..|:..|::.|...:     |..:: .|...
Zfish   293 HAPIAPTPLNGSSANTLKRKAFYMTGQGDMDSSYGNFNYSQQRSAQSPMYRMPDNSLVDSTRGNG 357

  Fly    85 FDASSDVITCVSFETDFLQKKTVSQEPYDSDQMAKEFIMQFAGMALT---VGQSLVFNFKDKKLL 146
            ||.::|. :.::|      |.|....|.|..   ::|..| ||.|||   .|.|       |..|
Zfish   358 FDRNADT-SSLAF------KPTKQSMPTDQQ---RKFGSQ-AGRALTPPSYGSS-------KGSL 404

  Fly   147 GLAVKSLEAI----DPKSLGEGKDTAMRNVR-FGRILGNTVVQFEKAENSSLNLQGKSKGKVVRQ 206
            | :::|.|:.    .|.....|.|:...... .|....::....|:.:||..:|......::::|
Zfish   405 G-SMRSGESFGKFGSPVMSDHGDDSRQHLPHSIGTATSSSHPAEEQLKNSDASLVEMVTTEILQQ 468

  Fly   207 SIINP--DWDFGKMGIGGLDKEFNSIFRRAFASRVFPPELVEQLGCKHVKGILLYGPPGTGKTLM 269
            :   |  ||.    .|.||:.. .:..:......:..|::...|... .:.|||:||.|||:||:
Zfish   469 T---PPVDWS----DIAGLEMA-KATIKDEVLWPILRPDMFSGLATL-PRSILLFGPQGTGRTLL 524

  Fly   270 ARQIGTMLNAREPKIVNGPQILDKYVGESEANVRRLFAEAEEEEKRLGPNSGLHIIIFDEIDAIC 334
            .|.:.:.|.|.. .:::|..::.|::||.|..|:..|..|...:    |:    ::...::|.:.
Zfish   525 GRCMASQLGAAF-LLLSGSALVTKWLGEGEKIVQASFLIARCRQ----PS----VVFISDVDLLL 580

  Fly   335 KQRGSVAGNSGVHDTVVNQLLTKIDGV--DQLNNILVIGMTNRRDMIDEALLRPGRLEVQMEISL 397
            ..:  ::..|.| :.:.::||.::|||  ....::||:..|::.:.|||:|.|  ....::.:.|
Zfish   581 SSQ--LSEESPV-NRIKSELLLQLDGVLSSPEEHVLVVCSTSKPEEIDESLRR--YFVKRLLVPL 640

  Fly   398 PNEQGRVQILNIHTKRMREFNKINDDVDNKEIAAL---TKNFSGAELEGLVRAAQSSAMNRLIKA 459
            |:...|.||::      :..::.|..:.:||:..|   |..|||.::..|.:.|....::.:..|
Zfish   641 PDATARHQIIS------QLLSQHNYCLSDKEVTLLVQRTDGFSGLDVVRLCQEALVGPLHGMPGA 699

  Fly   460 DAKVTVDPEAMEKLKVNRDDFLHSLEHDIKPAFGTAQEILD 500
            |....: |..|.  .|:..|| .::...|:|:.  :|:.||
Zfish   700 DLSGMI-PGQMR--PVSYQDF-ENVFCKIQPSI--SQKELD 734

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
comtNP_001259506.1 CDC48_N 5..83 CDD:215012 13/62 (21%)
CDC48_2 111..>158 CDD:215011 16/53 (30%)
SpoVK 242..699 CDD:223540 67/264 (25%)
AAA 256..397 CDD:278434 38/142 (27%)
AAA 539..668 CDD:278434
fignXP_021334341.1 EBV-NA3 <174..300 CDD:332796 3/6 (50%)
Herpes_UL32 <270..>444 CDD:283680 39/169 (23%)
SpoVK <464..734 CDD:223540 72/304 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0464
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.