DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment comt and Nsf2

DIOPT Version :9

Sequence 1:NP_001259506.1 Gene:comt / 47091 FlyBaseID:FBgn0000346 Length:745 Species:Drosophila melanogaster
Sequence 2:NP_001287318.1 Gene:Nsf2 / 41694 FlyBaseID:FBgn0266464 Length:752 Species:Drosophila melanogaster


Alignment Length:742 Identity:627/742 - (84%)
Similarity:687/742 - (92%) Gaps:3/742 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 AYILKATKCPTDELSLTNRAIVNVGDFPEEIKYADISPAPGQHFIFALEKT--VEVPSGYVGFSL 64
            |:.::|.|||||||||||:|||||.||.||:||.||||.||.|:||||||.  .|:|.|:|||||
  Fly     6 AHRMRAIKCPTDELSLTNKAIVNVSDFTEEVKYVDISPGPGLHYIFALEKISGPELPLGHVGFSL 70

  Fly    65 VQRKWAMVSINQELEVRPYRFDASSDVITCVSFETDFLQKKTVSQEPYDSDQMAKEFIMQFAGMA 129
            ||||||.:|||||::|||||||||:|:||.||||||||||||.:|||||||:|||||:||||||.
  Fly    71 VQRKWATLSINQEIDVRPYRFDASADIITLVSFETDFLQKKTTTQEPYDSDEMAKEFLMQFAGMP 135

  Fly   130 LTVGQSLVFNFKDKKLLGLAVKSLEAIDPKSLGEGKDTAMRNVRFGRILGNTVVQFEKAENSSLN 194
            |||||:|||.|||||.||||||:|||:||:::|:..... ||||||||||||||||||||||.||
  Fly   136 LTVGQTLVFQFKDKKFLGLAVKTLEAVDPRTVGDSLPKT-RNVRFGRILGNTVVQFEKAENSVLN 199

  Fly   195 LQGKSKGKVVRQSIINPDWDFGKMGIGGLDKEFNSIFRRAFASRVFPPELVEQLGCKHVKGILLY 259
            |||:||||:|||||||||||||||||||||||||:||||||||||||||||||||.|||||||||
  Fly   200 LQGRSKGKIVRQSIINPDWDFGKMGIGGLDKEFNAIFRRAFASRVFPPELVEQLGIKHVKGILLY 264

  Fly   260 GPPGTGKTLMARQIGTMLNAREPKIVNGPQILDKYVGESEANVRRLFAEAEEEEKRLGPNSGLHI 324
            ||||||||||||||||||||||||||||||||||||||||||:||||||||||||||||||||||
  Fly   265 GPPGTGKTLMARQIGTMLNAREPKIVNGPQILDKYVGESEANIRRLFAEAEEEEKRLGPNSGLHI 329

  Fly   325 IIFDEIDAICKQRGSVAGNSGVHDTVVNQLLTKIDGVDQLNNILVIGMTNRRDMIDEALLRPGRL 389
            |||||||||||.|||||||||||||||||||.|||||:|||||||||||||||||||||||||||
  Fly   330 IIFDEIDAICKARGSVAGNSGVHDTVVNQLLAKIDGVEQLNNILVIGMTNRRDMIDEALLRPGRL 394

  Fly   390 EVQMEISLPNEQGRVQILNIHTKRMREFNKINDDVDNKEIAALTKNFSGAELEGLVRAAQSSAMN 454
            ||||||||||||||||||||||||||:||||..||||.||||.||||||||||||||||||:|||
  Fly   395 EVQMEISLPNEQGRVQILNIHTKRMRDFNKIASDVDNNEIAAKTKNFSGAELEGLVRAAQSTAMN 459

  Fly   455 RLIKADAKVTVDPEAMEKLKVNRDDFLHSLEHDIKPAFGTAQEILDNMLARGVINWGAPVSNLLE 519
            ||||||:||.|||||||||:|.|.||||:|::|||||||.|||:|:|:||||:||||.||:.|||
  Fly   460 RLIKADSKVHVDPEAMEKLRVTRADFLHALDNDIKPAFGAAQEMLENLLARGIINWGPPVTELLE 524

  Fly   520 DGMLYVQQAKAPESSGLVSVLVAGAPNSGKTALAAQLAKMSDFPFVKVCSPEDMVGYTESAKCLH 584
            ||||.||||||.|||||||||:.|||||||:||||.||::||||||||||||||||:||||||||
  Fly   525 DGMLSVQQAKATESSGLVSVLIEGAPNSGKSALAANLAQLSDFPFVKVCSPEDMVGFTESAKCLH 589

  Fly   585 IRKIFDDAYRSMLSCIVVDNVERLLDYGSIGPRYSNMTLQALLVLLKKQPPKGRKLLILCTSSRR 649
            |||||||||||.||||||||||||||||.|||||||:||||||||||||||||||||||||||||
  Fly   590 IRKIFDDAYRSTLSCIVVDNVERLLDYGPIGPRYSNLTLQALLVLLKKQPPKGRKLLILCTSSRR 654

  Fly   650 EVLEEMEMLTAFTSVLHVPNLSKPDHVLAVLENTDIFSKGEIQAIGKKMAGKRVFIGIKKLLGLI 714
            :||||||||:||||||||.|||.|::|||||:::|:||..|:|:|.:||||||:.|||||||.||
  Fly   655 DVLEEMEMLSAFTSVLHVSNLSTPENVLAVLDDSDLFSPEELQSIARKMAGKRLCIGIKKLLALI 719

  Fly   715 DMARQTEQSQRAIKFLSKMEEEGGLDM 741
            ||.||:|..||.|||||||||||||:|
  Fly   720 DMIRQSEPHQRVIKFLSKMEEEGGLEM 746

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
comtNP_001259506.1 CDC48_N 5..83 CDD:215012 57/79 (72%)
CDC48_2 111..>158 CDD:215011 38/46 (83%)
SpoVK 242..699 CDD:223540 401/456 (88%)
AAA 256..397 CDD:278434 136/140 (97%)
AAA 539..668 CDD:278434 116/128 (91%)
Nsf2NP_001287318.1 CDC48_N 9..89 CDD:215012 57/79 (72%)
CDC48_2 117..>170 CDD:215011 41/52 (79%)
AAA 259..404 CDD:214640 140/144 (97%)
AAA 261..402 CDD:278434 136/140 (97%)
AAA 543..674 CDD:214640 118/130 (91%)
P-loop_NTPase 544..>613 CDD:304359 60/68 (88%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45449916
Domainoid 1 1.000 218 1.000 Domainoid score I732
eggNOG 1 0.900 - - E1_COG0464
Homologene 1 1.000 - - H4502
Inparanoid 1 1.050 552 1.000 Inparanoid score I255
Isobase 1 0.950 - 0 Normalized mean entropy S525
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D156590at33208
OrthoFinder 1 1.000 - - FOG0003053
OrthoInspector 1 1.000 - - mtm6536
orthoMCL 1 0.900 - - OOG6_101440
Panther 1 1.100 - - P PTHR23078
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1308
SonicParanoid 1 1.000 - - X2410
1413.780

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