DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment comt and nsf-1

DIOPT Version :9

Sequence 1:NP_001259506.1 Gene:comt / 47091 FlyBaseID:FBgn0000346 Length:745 Species:Drosophila melanogaster
Sequence 2:NP_001076603.1 Gene:nsf-1 / 266842 WormBaseID:WBGene00003818 Length:824 Species:Caenorhabditis elegans


Alignment Length:751 Identity:420/751 - (55%)
Similarity:546/751 - (72%) Gaps:21/751 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 ILKATKCPTDELSLTNRAIVNVGDFPE-EIKYADISPAPGQHFIFALEKTVEVPSGYVGFSLVQR 67
            :.:..|.|::|.:|.|.|.||..||.: :||:..::|.|..|:||::.....:..|.:.|.:..|
 Worm    67 MFRVRKAPSEEHTLANYAYVNRSDFDDKQIKHVRVNPGPAHHYIFSIRNDGSIKPGEIAFGVPHR 131

  Fly    68 KWAMVSINQELEVRPYRFDASSDVITCVSFETDFLQKKTVSQEPYDSDQMAKEFIMQFAGMALTV 132
            |||.:|::||:.|.|:.|. .|:.:..:....||..||.|:.||.::|.||:||.:||.|.|.:.
 Worm   132 KWAALSLDQEVRVTPFTFQ-QSEYVGSMILTADFNAKKNVTSEPLNADLMAREFSIQFGGQAFSK 195

  Fly   133 GQSLVFNFKDKK-----LLGLAVKSLEAID---------PKSLGEGKDTAMRNVRFGRILGNTVV 183
            |..:.|.|:||:     .|.|.|||:|..|         ..|..:...|..:.:..|.:|.|:|:
 Worm   196 GMQMAFRFEDKEKNKTHTLSLVVKSIEGFDIGKAAAAASGASNTDSSATKPKQIEAGELLPNSVI 260

  Fly   184 QFEKAENSSLNLQGKSKGKVVRQSIINPDWDFGKMGIGGLDKEFNSIFRRAFASRVFPPELVEQL 248
            .|:|.|.|.|||.||||||...:|||||||||.:|||||||.||:.||||||||||||||.:|||
 Worm   261 VFDKEEGSMLNLIGKSKGKSAYRSIINPDWDFQQMGIGGLDTEFSHIFRRAFASRVFPPEFIEQL 325

  Fly   249 GCKHVKGILLYGPPGTGKTLMARQIGTMLNAREPKIVNGPQILDKYVGESEANVRRLFAEAEEEE 313
            |.|||:||||:|||||||||||||||.||||||||||||||||||||||||:|||:|||:||||.
 Worm   326 GMKHVRGILLFGPPGTGKTLMARQIGKMLNAREPKIVNGPQILDKYVGESESNVRKLFADAEEEW 390

  Fly   314 KRLGPNSGLHIIIFDEIDAICKQRGSVAGNSGVHDTVVNQLLTKIDGVDQLNNILVIGMTNRRDM 378
            :|.|.|||||||||||||||||||||:||:|.||||||||||:|:|||:||||||||||||||||
 Worm   391 RRCGANSGLHIIIFDEIDAICKQRGSMAGSSSVHDTVVNQLLSKMDGVEQLNNILVIGMTNRRDM 455

  Fly   379 IDEALLRPGRLEVQMEISLPNEQGRVQILNIHTKRMREFNKINDDVDNKEIAALTKNFSGAELEG 443
            ||||||||||||||||:|||:|.||:|||.|||.||||:||::.:||.::|:..|||||||||||
 Worm   456 IDEALLRPGRLEVQMEVSLPDETGRLQILKIHTARMREYNKMDPNVDLEDISKRTKNFSGAELEG 520

  Fly   444 LVRAAQSSAMNRLIKADAKVTVDPEAMEKLKVNRDDFLHSLEHDIKPAFGTAQEILDNMLARGVI 508
            |||||||||||||:||..|...||:|:|||.:|..||.::||:|||||||.:.|.|:..|:||:|
 Worm   521 LVRAAQSSAMNRLVKAGGKAQADPDAIEKLAINSGDFDYALENDIKPAFGRSDESLNRFLSRGMI 585

  Fly   509 NWGAPVSNLLEDGMLYVQQAKAPESSGLVSVLVAGAPNSGKTALAAQLAKMSDFPFVKVCSPEDM 573
            .||..|:.:|::|.|.....|.||:||..:|::|||..:|||:||||:||.||||||||.||||.
 Worm   586 VWGPEVTKILDEGSLLAATVKNPENSGFRTVVLAGAAKTGKTSLAAQMAKSSDFPFVKVISPEDT 650

  Fly   574 VGYTESAKCLHIRKIFDDAYRSMLSCIVVDNVERLLDYGSIGPRYSNMTLQALLVLLKKQPPKGR 638
            ||::|||||:.::|.|:||.||.||.:::||:|||:||..:||||||:.:|||||||...||.|.
 Worm   651 VGFSESAKCMALKKAFEDAKRSKLSVLLIDNLERLIDYHPVGPRYSNLVIQALLVLLNAPPPAGH 715

  Fly   639 KLLILCTSSRREVLEEMEMLTAFTSVLHVPNLSKPDHVLAVLENTDIFSKGEIQAIGKKMA---- 699
            :|.::.|||.|..|.:|.::..|..|:.:|.|:....::.|::.::|:|..::..|.:|:|    
 Worm   716 RLFVIATSSDRMFLRDMGLMDVFGDVIDIPKLTTAGQMMNVIQESNIYSDDQLPMIEQKLASICR 780

  Fly   700 GKRVF-IGIKKLLGLIDMARQTEQSQRAIKFLSKME 734
            |:... :|||.||.||:.|||.|...|....|:.||
 Worm   781 GEGFHGVGIKHLLELIESARQCEADYRVPTLLNMME 816

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
comtNP_001259506.1 CDC48_N 5..83 CDD:215012 27/78 (35%)
CDC48_2 111..>158 CDD:215011 22/60 (37%)
SpoVK 242..699 CDD:223540 296/456 (65%)
AAA 256..397 CDD:278434 124/140 (89%)
AAA 539..668 CDD:278434 72/128 (56%)
nsf-1NP_001076603.1 CDC48_N 68..147 CDD:215012 27/78 (35%)
CDC48_2 174..>222 CDD:215011 20/47 (43%)
AAA 331..476 CDD:214640 127/144 (88%)
AAA 333..474 CDD:278434 124/140 (89%)
AAA 609..746 CDD:99707 75/136 (55%)
AAA 614..748 CDD:214640 73/133 (55%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160159739
Domainoid 1 1.000 252 1.000 Domainoid score I1136
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H4502
Inparanoid 1 1.050 813 1.000 Inparanoid score I244
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG52406
OrthoDB 1 1.010 - - D156590at33208
OrthoFinder 1 1.000 - - FOG0003053
OrthoInspector 1 1.000 - - otm14482
orthoMCL 1 0.900 - - OOG6_101440
Panther 1 1.100 - - LDO PTHR23078
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1308
SonicParanoid 1 1.000 - - X2410
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1514.940

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