Sequence 1: | NP_001259506.1 | Gene: | comt / 47091 | FlyBaseID: | FBgn0000346 | Length: | 745 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_496273.1 | Gene: | cdc-48.1 / 174624 | WormBaseID: | WBGene00007352 | Length: | 809 | Species: | Caenorhabditis elegans |
Alignment Length: | 783 | Identity: | 193/783 - (24%) |
---|---|---|---|
Similarity: | 322/783 - (41%) | Gaps: | 190/783 - (24%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MAYILKATKCPTDELSLTNRAI-----VNVGDFPEEIKYADISPAPGQHF-----IFALEKTVEV 55
Fly 56 PSGYVGFSLVQRKWAMVSINQELEVRPYRFDA-----SSDVITCVSFETDFLQKKTVSQEPYDSD 115
Fly 116 QMAKEFIMQFAGMALTVGQSLVFNFKDKKLLGLAVKSLEAIDPKSLGEGKDTAMRNVRFGRILGN 180
Fly 181 TVVQFEKAENSSLNLQGKSKGKVVRQSIINPDWDFGKMGIGGLDKEFNSIFRRAFASRVFPPELV 245
Fly 246 EQLGCKHVKGILLYGPPGTGKTLMARQIGTMLNAREPK----IVNGPQILDKYVGESEANVRRLF 306
Fly 307 AEAEEEEKRLGPNSGLHIIIFDEIDAICKQRGSVAGNSGVHDTVVNQLLTKIDGVDQLNNILVIG 371
Fly 372 MTNRRDMIDEALLRPGRLEVQMEISLPNEQGRVQILNIHTKRMREFNKINDDVDNKEIAALTKNF 436
Fly 437 SGAELEGLV-RAAQSSAMNRLIKADAK-VTVDPEAMEKLKVNRDDFLHSLEHDIKPAFGTAQEIL 499
Fly 500 DNML---ARGVINWGAPVSNL----LEDGMLYVQQAKAPESSGLVSVLVAGAPNSGKTALAAQLA 557
Fly 558 KMSDFPFVKVCSPEDMV---GYTESAKCLHIRKIFDDAYRSMLSCIV----VDNVERLL------ 609
Fly 610 DYGSIGPRYSNMTLQALLVLLKKQPPKGRKLLILCTSSRREVLEEMEMLTA-FTSVLHVP---NL 670
Fly 671 SKPDHVLAVLENTDIFSKGEIQAIGKKMAGKRVFIGIKKLLGLIDMARQTEQSQRAIKFL--SKM 733
Fly 734 EEE 736 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
comt | NP_001259506.1 | CDC48_N | 5..83 | CDD:215012 | 13/87 (15%) |
CDC48_2 | 111..>158 | CDD:215011 | 2/46 (4%) | ||
SpoVK | 242..699 | CDD:223540 | 143/486 (29%) | ||
AAA | 256..397 | CDD:278434 | 61/144 (42%) | ||
AAA | 539..668 | CDD:278434 | 30/142 (21%) | ||
cdc-48.1 | NP_496273.1 | CDC48_N | 31..112 | CDD:280513 | 10/44 (23%) |
CDC48 | 52..775 | CDD:273521 | 193/783 (25%) | ||
CDC48_2 | 137..197 | CDD:215011 | 13/89 (15%) | ||
AAA | 247..376 | CDD:278434 | 60/143 (42%) | ||
AAA | 520..654 | CDD:278434 | 30/143 (21%) | ||
Vps4_C | <727..771 | CDD:286426 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG0464 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.810 |