DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Adf1 and madf-2

DIOPT Version :9

Sequence 1:NP_001260730.1 Gene:Adf1 / 47082 FlyBaseID:FBgn0284249 Length:274 Species:Drosophila melanogaster
Sequence 2:NP_492896.1 Gene:madf-2 / 173019 WormBaseID:WBGene00009461 Length:290 Species:Caenorhabditis elegans


Alignment Length:283 Identity:58/283 - (20%)
Similarity:111/283 - (39%) Gaps:57/283 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 LIEAVKLNPVIYDRSHY---NYKHFVRKAQTWKQIAETLGVPEQKCTK--------RWKSLRDKF 69
            ||.|::..|||:|::::   ||:  ..|....:::...|....|...|        :||:|:|.|
 Worm    12 LINAIRNRPVIWDKNYFGESNYR--TLKTSCLREVTSELNSMFQMPIKFTCEDVRSQWKNLKDTF 74

  Fly    70 AREMKLCQESR----------WRYFKQMQFLVDSIRQYRESLLG-------KCANGSQSANQVAD 117
            .|:::...|.:          |::::.:.||.:.    ....||       :.|..|.|..|.|.
 Worm    75 VRKLRWVHEGKYMEDAMKEPTWKFYRMLTFLDEK----EAKRLGDTCEHTYELAPNSTSCGQRAQ 135

  Fly   118 PSQQQQAQQQTVVDIF-----AQPFNGSATTSAQALTHPHEITVTSDAQLATAVGKDQKPYFYEP 177
            .|.:..:.::.:..:|     .|....|...|:|..|..:|..:||.:...|:....::...|.|
 Worm   136 ISYEPTSTEEKMFQMFNNQPPPQLSQQSMIDSSQIATCSNEPKMTSSSTFVTSSTSLKRGVHYSP 200

  Fly   178 P---------LKRERSEEEHSD-------NMLNTIKIFQNNVSQAVSAEDQ--SFGMVVTDMLNT 224
            .         |:.|..:|:...       ..::.|:..|...:..|:.:|:  .||.:|...|..
 Worm   201 TRSPNGSSSGLEEELEDEDEQPGRKKSCRRQVSNIQPMQVITTPPVAHQDEFDHFGAMVAANLRR 265

  Fly   225 LGVRQKAEAKVHIIKYLTDMQLL 247
            :...|.....:.:.:.|.|...|
 Worm   266 IANEQGRMNALRVQRRLYDALFL 288

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Adf1NP_001260730.1 MADF 15..95 CDD:214738 23/99 (23%)
madf-2NP_492896.1 MADF 11..107 CDD:214738 23/96 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160156217
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.840

Return to query results.
Submit another query.