DRSC/TRiP Functional Genomics Resources

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Protein Alignment acj6 and POU6F1

DIOPT Version :9

Sequence 1:NP_524876.1 Gene:acj6 / 47080 FlyBaseID:FBgn0000028 Length:396 Species:Drosophila melanogaster
Sequence 2:XP_016874997.1 Gene:POU6F1 / 5463 HGNCID:9224 Length:613 Species:Homo sapiens


Alignment Length:354 Identity:98/354 - (27%)
Similarity:146/354 - (41%) Gaps:86/354 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 SCDSLESRLLEDASLLCNSWSARQNGDIFAGINDGILSRAEALAAVDIQKHQAQHVHSQMPSQIK 112
            |...:.|::|.:|           .|.:. |....:::.|...|....|..|.|.|..|:....:
Human   310 SMPGISSQILTNA-----------QGQVI-GTLPWVVNSASVAAPAPAQSLQVQAVTPQLLLNAQ 362

  Fly   113 HDVMYHHHSMSGPPQRPLQENPFSRQMHHSMDQLDMLDPTGSMTTLAPISESPL----------- 166
            ..|:....|...||  |:.....|.....:..::..:.||.::...|.:..||.           
Human   363 GQVIATLASSPLPP--PVAVRKPSTPESPAKSEVQPIQPTPTVPQPAVVIASPAPAAKPSASAPI 425

  Fly   167 ------TPTHQHLHGSYHSMNHMMSHHHPGTLSGHTGGHHGHSAVHHPVITAAVAAAGLHPDTDT 225
                  |||...|..|               |..||                        |..|.
Human   426 PITCSETPTVSQLVSS---------------LEPHT------------------------PSLDE 451

  Fly   226 DP---RELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIAL 287
            |.   .|:..||:.||.||:.||:||..||:||...:.|   |.|||.|||||.|.::..:...|
Human   452 DGINLEEIREFAKNFKIRRLSLGLTQTQVGQALTATEGP---AYSQSAICRFEKLDITPKSAQKL 513

  Fly   288 KPILQAWLEEAEAQAKNKRRD-----PDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSG 347
            ||:|:.||.|||.:.:..:::     ...||     :|:::|||.......:|.|||...|.|:|
Human   514 KPVLEKWLNEAELRNQEGQQNLMEFVGGEPS-----KKRKRRTSFTPQAIEALNAYFEKNPLPTG 573

  Fly   348 EKIAAIAEKLDLKKNVVRVWFCNQRQKQK 376
            ::|..||::|:..:.||||||||:||..|
Human   574 QEITEIAKELNYDREVVRVWFCNRRQTLK 602

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
acj6NP_524876.1 POU 222..299 CDD:197673 35/79 (44%)
Homeobox 323..377 CDD:395001 25/54 (46%)
POU6F1XP_016874997.1 Atrophin-1 <41..407 CDD:331285 21/110 (19%)
POU 451..525 CDD:197673 34/76 (45%)
Homeobox 549..602 CDD:306543 24/52 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165156613
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.840

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