DRSC/TRiP Functional Genomics Resources

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Protein Alignment acj6 and POU4F1

DIOPT Version :9

Sequence 1:NP_524876.1 Gene:acj6 / 47080 FlyBaseID:FBgn0000028 Length:396 Species:Drosophila melanogaster
Sequence 2:NP_006228.3 Gene:POU4F1 / 5457 HGNCID:9218 Length:419 Species:Homo sapiens


Alignment Length:461 Identity:203/461 - (44%)
Similarity:240/461 - (52%) Gaps:124/461 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 MSMYSTTDKMKMSAPSCFPGRYSPSYRSSEQMRR-CMPNPSIHISSSCDSLESRLLEDASLLCNS 66
            |||.|......|. |:....:|...:.|||.:|| |:|.|.:                       
Human     2 MSMNSKQPHFAMH-PTLPEHKYPSLHSSSEAIRRACLPTPPL----------------------- 42

  Fly    67 WSARQNGDIFAGINDGILSRAEALAAVDIQKHQAQHVHSQMPSQIKHDVMYHHHSMSGPPQRPLQ 131
                 ..::||.:::.:|:||||||||||...|.:      ....|.|..|  |:|:..|.....
Human    43 -----QSNLFASLDETLLARAEALAAVDIAVSQGK------SHPFKPDATY--HTMNSVPCTSTS 94

  Fly   132 ENPFSRQMHH-----SMDQLDMLDPTGSMTTLAPIS---------------ESP----------- 165
            ..|.:...||     :::..|:||...| .:||.::               :.|           
Human    95 TVPLAHHHHHHHHHQALEPGDLLDHISS-PSLALMAGAGGAGAAAGGGGAHDGPGGGGGPGGGGG 158

  Fly   166 -----------------------LTPTHQHLHGSYHSMNHMMSH-------------HHPGTLSG 194
                                   |.....|.|...||:.| :||             .|||.:: 
Human   159 PGGGPGGGGGGGPGGGGGGPGGGLLGGSAHPHPHMHSLGH-LSHPAAAAAMNMPSGLPHPGLVA- 221

  Fly   195 HTGGHHGHSA----------VHHPVITAAVAAAGLHP--DTDTDPRELEAFAERFKQRRIKLGVT 247
             ...|||.:|          .......|.|.||||..  |:||||||||||||||||||||||||
Human   222 -AAAHHGAAAAAAAAAAGQVAAASAAAAVVGAAGLASICDSDTDPRELEAFAERFKQRRIKLGVT 285

  Fly   248 QADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAP 312
            |||||.||||||:||||:||||||||||||||||||||||||||||||||||...:.|...|:  
Human   286 QADVGSALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPILQAWLEEAEGAQREKMNKPE-- 348

  Fly   313 SVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKR 377
             :...|||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||
Human   349 -LFNGGEKKRKRTSIAAPEKRSLEAYFAVQPRPSSEKIAAIAEKLDLKKNVVRVWFCNQRQKQKR 412

  Fly   378 IVSSVT 383
            :..|.|
Human   413 MKFSAT 418

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
acj6NP_524876.1 POU 222..299 CDD:197673 72/76 (95%)
Homeobox 323..377 CDD:395001 52/53 (98%)
POU4F1NP_006228.3 POU-IV box 57..66 8/8 (100%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 94..117 4/22 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 131..197 6/65 (9%)
POU 260..337 CDD:197673 72/76 (95%)
Homeobox 358..411 CDD:278475 51/52 (98%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165156611
Domainoid 1 1.000 141 1.000 Domainoid score I4710
eggNOG 1 0.900 - - E1_KOG3802
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S2309
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D396215at33208
OrthoFinder 1 1.000 - - FOG0001337
OrthoInspector 1 1.000 - - otm42141
orthoMCL 1 0.900 - - OOG6_105854
Panther 1 1.100 - - LDO PTHR11636
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2889
SonicParanoid 1 1.000 - - X830
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1413.690

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