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Protein Alignment acj6 and Ccdc160
DIOPT Version :9
Sequence 1: | NP_524876.1 |
Gene: | acj6 / 47080 |
FlyBaseID: | FBgn0000028 |
Length: | 396 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001029231.1 |
Gene: | Ccdc160 / 434778 |
MGIID: | 3588225 |
Length: | 323 |
Species: | Mus musculus |
Alignment Length: | 105 |
Identity: | 23/105 - (21%) |
Similarity: | 34/105 - (32%) |
Gaps: | 45/105 - (42%) |
- Green bases have known domain annotations that are detailed below.
Fly 238 KQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTL-------SHNNMIALKPILQAWL 295
::||:.:....|:...|. ::||.| ||....| .||
Mouse 80 RERRMNVSKNDANTNSAF------------------WDSLHLDDATKESSHRRESA-----SAW- 120
Fly 296 EEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSL 335
||::.|.|..| .||:.:.|.|.|..|
Mouse 121 --------NKKKLPAATQV------TRKKWTEAMPPKLRL 146
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
acj6 | NP_524876.1 |
POU |
222..299 |
CDD:197673 |
12/67 (18%) |
Homeobox |
323..377 |
CDD:395001 |
5/13 (38%) |
Software error:
Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.
For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message
and the time and date of the error.