DRSC/TRiP Functional Genomics Resources

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Protein Alignment acj6 and pou4f2

DIOPT Version :9

Sequence 1:NP_524876.1 Gene:acj6 / 47080 FlyBaseID:FBgn0000028 Length:396 Species:Drosophila melanogaster
Sequence 2:NP_997972.1 Gene:pou4f2 / 402816 ZFINID:ZDB-GENE-040401-1 Length:384 Species:Danio rerio


Alignment Length:407 Identity:196/407 - (48%)
Similarity:233/407 - (57%) Gaps:94/407 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 STTDKMKMSAP--SCFPGRYSPSYR-----SSEQMRR-CMPNPSIHISSSCDSLESRLLEDASLL 63
            |::..:..:||  ||...|:|.:..     |||.||| |:|.|.                     
Zfish    31 SSSSTLTSNAPSSSCSSSRHSSTISSSGGGSSEAMRRACLPTPP--------------------- 74

  Fly    64 CNSWSARQNGDIFAGINDGILSRAEALAAVDIQKHQAQHVHSQMPSQIKHDVMYHHHSMSGPPQR 128
                     .:||.|:::.:|:||||||||||            .||.|.    |||    ||  
Zfish    75 ---------SNIFGGLDESLLARAEALAAVDI------------VSQTKS----HHH----PP-- 108

  Fly   129 PLQENPFSRQ-MHHSMDQLDMLDPTGSMTTLAPISESPLTPTHQHLHGSYHSMNH------MMSH 186
              ..:||... .:|:|:.|..  .:.|.::..|||......:|.|.|..:|...|      ::.|
Zfish   109 --HHSPFKPDATYHTMNTLPC--TSSSSSSSVPISHPSALASHHHHHHHHHHQPHQALEGDLLDH 169

  Fly   187 HHPG-TLSGHTGG----------HHGHSAVHHPVITAAVAAAGLH---------PDTDTDPRELE 231
            ..|| .|:|...|          |..|.|..:.:..||:..|..|         .|.|.|||:||
Zfish   170 ITPGLALAGAMAGPDGSVVSTPAHPAHMAGMNHMHQAAINMAHAHGLPSHMGCMSDVDADPRDLE 234

  Fly   232 AFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLE 296
            |||||||||||||||||||||.|||:||:||||:|||||||||||||||||||||||||||||||
Zfish   235 AFAERFKQRRIKLGVTQADVGSALASLKIPGVGSLSQSTICRFESLTLSHNNMIALKPILQAWLE 299

  Fly   297 EAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKK 361
            |||   |:.|...:.|.:....||||||||||||||||||||||:|||||.||||||||||||||
Zfish   300 EAE---KSHREKLNKPELFNGAEKKRKRTSIAAPEKRSLEAYFAIQPRPSSEKIAAIAEKLDLKK 361

  Fly   362 NVVRVWFCNQRQKQKRI 378
            ||||||||||||||||:
Zfish   362 NVVRVWFCNQRQKQKRM 378

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
acj6NP_524876.1 POU 222..299 CDD:197673 69/76 (91%)
Homeobox 323..377 CDD:395001 51/53 (96%)
pou4f2NP_997972.1 POU 225..302 CDD:197673 69/76 (91%)
Homeobox 323..376 CDD:278475 50/52 (96%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170592223
Domainoid 1 1.000 114 1.000 Domainoid score I6018
eggNOG 1 0.900 - - E1_KOG3802
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 308 1.000 Inparanoid score I2604
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D396215at33208
OrthoFinder 1 1.000 - - FOG0001337
OrthoInspector 1 1.000 - - otm25862
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11636
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2889
SonicParanoid 1 1.000 - - X830
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1312.890

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